RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 HIST1H2AAQ96QV6 131 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 POP1Q99575 1024 aaKnown RBP8.97□□□□□ -0.97
CTNND1-201ENST00000358694 CPNE1Q99829 537 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 C2orf49Q9BVC5 232 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-201ENST00000358694 ELOVL4Q9GZR5 314 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 TUT1Q9H6E5 874 aaKnown RBP8.97□□□□□ -0.97
CTNND1-201ENST00000358694 ING4Q9UNL4 249 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 A0A096LPK6 155 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 PDHXO00330 501 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 HAT1O14929 419 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 OR10H3O60404 316 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 IFNGP01579 166 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 NPR3P17342 541 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 AKR1D1P51857 326 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 FMR1Q06787 632 aaKnown RBP eCLIP8.97□□□□□ -0.971e-6■■■■□ 23.3
CTNND1-201ENST00000358694 LAMTOR4Q0VGL1 99 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 KCTD21Q4G0X4 260 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 RASGRP2Q7LDG7 609 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 AMIGO1Q86WK6 493 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 C8orf59Q8N0T1 100 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-201ENST00000358694 RNF148Q8N7C7 305 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 AGBL3Q8NEM8 1001 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 KAT5Q92993 513 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 MPP4Q96JB8 637 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 MLPHQ9BV36 600 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-201ENST00000358694 TRIM2Q9C040 744 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 WHRNQ9P202 907 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 DNMT3LQ9UJW3 386 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 IKZF3Q9UKT9 509 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 OGDHLQ9ULD0 1010 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 MYRFQ9Y2G1 1151 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 TBC1D3DA0A087WVF3 549 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 TBC1D3IA0A087WXS9 549 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 TBC1D3EA0A087X179 549 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 A0A087X1B8 175 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 TBC1D3KA0A087X1G2 549 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 TBC1D3FA6NER0 549 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-201ENST00000358694 TBC1D3LB9A6J9 549 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 FOXN3O00409 490 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-201ENST00000358694 XKRYO14609 159 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 TBC1D3HP0C7X1 549 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 ITGA2P17301 1181 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 S100A1P23297 94 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 TBC1D3GQ6DHY5 549 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 TBC1D3CQ6IPX1 549 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 CES3Q6UWW8 571 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 DEF8Q6ZN54 512 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 TBC1D3Q8IZP1 549 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-201ENST00000358694 PHF10Q8WUB8 498 aaKnown RBP8.97□□□□□ -0.97
CTNND1-201ENST00000358694 TRHDEQ9UKU6 1024 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 SYNPO2Q9UMS6 1093 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 VPS4AQ9UN37 437 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 ERGIC3Q9Y282 383 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 AP3M1Q9Y2T2 418 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 USP6P35125 1406 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 C15orf38-AP3S2A0A0A6YYH1 394 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 A0A1W2PQ72 361 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 TTC34A8MYJ7 566 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 YBX3P16989 372 aaKnown RBP eCLIP8.97□□□□□ -0.979e-12■□□□□ 9.1
CTNND1-201ENST00000358694 TAS2R41P59536 307 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 SAMD4BQ5PRF9 694 aaKnown RBP8.97□□□□□ -0.97
CTNND1-201ENST00000358694 CHRDL2Q6WN34 429 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 ARPINQ7Z6K5 226 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 OR6Y1Q8NGX8 325 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 ZNF558Q96NG5 402 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 ASB2Q96Q27 587 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 MAPRE3Q9UPY8 281 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 PCDHA3Q9Y5H8 950 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 SCAMP3O14828 347 aaKnown RBP8.97□□□□□ -0.97
CTNND1-201ENST00000358694 PLIN3O60664 434 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 NOS1APO75052 506 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-201ENST00000358694 RECQL5O94762 991 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-201ENST00000358694 CYB5AP00167 134 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 SERPINE1P05121 402 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 IGKV5-2P06315 115 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 AKR1A1P14550 325 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 ATP5C1P36542 298 aaKnown RBP8.97□□□□□ -0.97
CTNND1-201ENST00000358694 GP5P40197 560 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 NPTX2P47972 431 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 SLC26A2P50443 739 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 PRKAA2P54646 552 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 ITIH4Q14624 930 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 XKR6Q5GH73 641 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 STYK1Q6J9G0 422 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 RBM23Q86U06 439 aaKnown RBP8.97□□□□□ -0.97
CTNND1-201ENST00000358694 COX4I2Q96KJ9 171 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 PLEKHF1Q96S99 279 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 GSDMCQ9BYG8 508 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 SLC39A8Q9C0K1 460 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 TSPAN16Q9UKR8 245 aa8.97□□□□□ -0.97
CTNND1-201ENST00000358694 MAST1Q9Y2H9 1570 aa8.96□□□□□ -0.97
CTNND1-201ENST00000358694 PGRMC2O15173 223 aa8.96□□□□□ -0.97
CTNND1-201ENST00000358694 MATN4O95460 622 aa8.96□□□□□ -0.97
CTNND1-201ENST00000358694 SERPINA3P01011 423 aa8.96□□□□□ -0.97
CTNND1-201ENST00000358694 CSH1P0DML2 217 aa8.96□□□□□ -0.97
CTNND1-201ENST00000358694 CSH2P0DML3 217 aa8.96□□□□□ -0.97
CTNND1-201ENST00000358694 RPS6KA3P51812 740 aa8.96□□□□□ -0.97
CTNND1-201ENST00000358694 CREMQ03060 361 aa8.96□□□□□ -0.97
CTNND1-201ENST00000358694 ARHGEF19Q8IW93 802 aa8.96□□□□□ -0.97
CTNND1-201ENST00000358694 BPIFB6Q8NFQ5 453 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms