RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 DCAF4L2Q8NA75 395 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 FBF1Q8TES7 1133 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 STAMBPL1Q96FJ0 436 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 PKNOX2Q96KN3 472 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 ZNF576Q9H609 170 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 SYBUQ9NX95 663 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 BFARQ9NZS9 450 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 CDH22Q9UJ99 828 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 WNT6Q9Y6F9 365 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 PDE4DIPQ5VU43 2346 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 NUP210Q8TEM1 1887 aaPredicted RBP13.19□□□□□ -0.3
CCDC7-202ENST00000302316 HMGB1P1B2RPK0 211 aaPredicted RBP13.19□□□□□ -0.3
CCDC7-202ENST00000302316 NEDD8-MDP1E9PL57 170 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 AP3B1O00203 1094 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 MUSKO15146 869 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 RGS16O15492 202 aaPredicted RBP13.19□□□□□ -0.3
CCDC7-202ENST00000302316 TCEA3O75764 348 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 LMAN2Q12907 356 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 AGBL2Q5U5Z8 902 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 RNF43Q68DV7 783 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 ANKRD54Q6NXT1 300 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 PRPF39Q86UA1 669 aaKnown RBP13.19□□□□□ -0.3
CCDC7-202ENST00000302316 TMEM25Q86YD3 366 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 SH2D3CQ8N5H7 860 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 XPO6Q96QU8 1125 aaKnown RBP13.19□□□□□ -0.3
CCDC7-202ENST00000302316 SEMA3CQ99985 751 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 TRIM56Q9BRZ2 755 aaKnown RBP13.19□□□□□ -0.3
CCDC7-202ENST00000302316 SAMD15Q9P1V8 674 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 KIAA1522Q9P206 1035 aaPredicted RBP13.19□□□□□ -0.3
CCDC7-202ENST00000302316 VPS51Q9UID3 782 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 CLEC4EQ9ULY5 219 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 OR51B4Q9Y5P0 310 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 TCRBV9S1A1TA0A576 114 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 TTC24A2A3L6 582 aaPredicted RBP13.18□□□□□ -0.3
CCDC7-202ENST00000302316 POC1B-GALNT4F8VUJ3 575 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 AGTP01019 485 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 PGAM1P18669 254 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 STX2P32856 288 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 WNT3AP56704 352 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 CBX1P83916 185 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 KLHL38Q2WGJ6 581 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 SYCE2Q6PIF2 218 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 KDELC1Q6UW63 502 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 LINGO4Q6UY18 593 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 UNC5AQ6ZN44 842 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 FIBINQ8TAL6 211 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 ARRDC2Q8TBH0 407 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 FGF13Q92913 245 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 IRF7Q92985 503 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 OTUB2Q96DC9 234 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 ALG14Q96F25 216 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 PGM2Q96G03 612 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 MRGPRX2Q96LB1 330 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 PSKH2Q96QS6 385 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 MGME1Q9BQP7 344 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 C2orf49Q9BVC5 232 aaPredicted RBP13.18□□□□□ -0.3
CCDC7-202ENST00000302316 BBS2Q9BXC9 721 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 LINC00597Q9H2U6 94 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 ACSS3Q9H6R3 686 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 SPHK2Q9NRA0 654 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 VPS45Q9NRW7 570 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 RABGEF1Q9UJ41 708 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 SLC9A3R1O14745 358 aaPredicted RBP13.18□□□□□ -0.3
CCDC7-202ENST00000302316 ZMPSTE24O75844 475 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 TMCC1O94876 653 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 PENKP01210 267 aaPredicted RBP13.18□□□□□ -0.3
CCDC7-202ENST00000302316 MMP2P08253 660 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 WEE1P30291 646 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 CD70P32970 193 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 ADRA1AP35348 466 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 EFTUD2Q15029 972 aaKnown RBP eCLIP13.18□□□□□ -0.3
CCDC7-202ENST00000302316 FAM78AQ5JUQ0 283 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 KDELC2Q7Z4H8 507 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 CCNJLQ8IV13 435 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 APCDD1Q8J025 514 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 GSDMBQ8TAX9 411 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 EXOC2Q96KP1 924 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 NAT9Q9BTE0 207 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 CTNNAL1Q9UBT7 734 aa13.18□□□□□ -0.3
CCDC7-202ENST00000302316 NOVA2Q9UNW9 492 aaKnown RBP13.18□□□□□ -0.3
CCDC7-202ENST00000302316 ATP9BO43861 1147 aa13.17□□□□□ -0.3
CCDC7-202ENST00000302316 CDH16O75309 829 aa13.17□□□□□ -0.3
CCDC7-202ENST00000302316 GJB3O75712 270 aa13.17□□□□□ -0.3
CCDC7-202ENST00000302316 GSTA2P09210 222 aa13.17□□□□□ -0.3
CCDC7-202ENST00000302316 TPH1P17752 444 aa13.17□□□□□ -0.3
CCDC7-202ENST00000302316 VIPR2P41587 438 aa13.17□□□□□ -0.3
CCDC7-202ENST00000302316 NPY2RP49146 381 aa13.17□□□□□ -0.3
CCDC7-202ENST00000302316 SKOR1P84550 965 aa13.17□□□□□ -0.3
CCDC7-202ENST00000302316 LY6G5CQ5SRR4 150 aa13.17□□□□□ -0.3
CCDC7-202ENST00000302316 CERCAMQ5T4B2 595 aa13.17□□□□□ -0.3
CCDC7-202ENST00000302316 ALG1LQ6GMV1 187 aa13.17□□□□□ -0.3
CCDC7-202ENST00000302316 SMARCD2Q92925 531 aa13.17□□□□□ -0.3
CCDC7-202ENST00000302316 RSPRY1Q96DX4 576 aa13.17□□□□□ -0.3
CCDC7-202ENST00000302316 MRRFQ96E11 262 aaKnown RBP13.17□□□□□ -0.3
CCDC7-202ENST00000302316 ASB16Q96NS5 453 aa13.17□□□□□ -0.3
CCDC7-202ENST00000302316 CYTH2Q99418 400 aa13.17□□□□□ -0.3
CCDC7-202ENST00000302316 IL22Q9GZX6 179 aa13.17□□□□□ -0.3
CCDC7-202ENST00000302316 STMN4Q9H169 189 aaPredicted RBP13.17□□□□□ -0.3
CCDC7-202ENST00000302316 PRO3102Q9H379 93 aa13.17□□□□□ -0.3
CCDC7-202ENST00000302316 PLAC1Q9HBJ0 212 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms