RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 BEST2Q8NFU1 509 aa27.87■■■□□ 2.05
CBX4-201ENST00000269397 TSPAN14Q8NG11 270 aa27.87■■■□□ 2.05
CBX4-201ENST00000269397 USP33Q8TEY7 942 aa27.87■■■□□ 2.05
CBX4-201ENST00000269397 SNX27Q96L92 541 aa27.87■■■□□ 2.05
CBX4-201ENST00000269397 HSFY1Q96LI6 401 aa27.87■■■□□ 2.05
CBX4-201ENST00000269397 NPY6RQ99463 290 aa27.87■■■□□ 2.05
CBX4-201ENST00000269397 FTHL17Q9BXU8 183 aa27.87■■■□□ 2.05
CBX4-201ENST00000269397 TRPV6Q9H1D0 765 aa27.87■■■□□ 2.05
CBX4-201ENST00000269397 NXF3Q9H4D5 531 aaKnown RBP27.87■■■□□ 2.05
CBX4-201ENST00000269397 SNX13Q9Y5W8 968 aa27.87■■■□□ 2.05
CBX4-201ENST00000269397 APOA4P06727 396 aa27.86■■■□□ 2.05
CBX4-201ENST00000269397 GALK1P51570 392 aa27.86■■■□□ 2.05
CBX4-201ENST00000269397 COG7P83436 770 aa27.86■■■□□ 2.05
CBX4-201ENST00000269397 PDAP1Q13442 181 aaKnown RBP27.86■■■□□ 2.05
CBX4-201ENST00000269397 KCTD2Q14681 263 aa27.86■■■□□ 2.05
CBX4-201ENST00000269397 TSTD2Q5T7W7 516 aa27.86■■■□□ 2.05
CBX4-201ENST00000269397 TRIML2Q8N7C3 387 aa27.86■■■□□ 2.05
CBX4-201ENST00000269397 CAAP1Q9H8G2 361 aa27.86■■■□□ 2.05
CBX4-201ENST00000269397 AP4S1Q9Y587 144 aa27.86■■■□□ 2.05
CBX4-201ENST00000269397 PCDHGA7Q9Y5G6 932 aa27.86■■■□□ 2.05
CBX4-201ENST00000269397 WDR90Q96KV7 1748 aa27.86■■■□□ 2.05
CBX4-201ENST00000269397 RPL10P27635 214 aaKnown RBP27.86■■■□□ 2.05
CBX4-201ENST00000269397 EPHX2P34913 555 aa27.86■■■□□ 2.05
CBX4-201ENST00000269397 SCNN1AP37088 669 aa27.86■■■□□ 2.05
CBX4-201ENST00000269397 RPL34P49207 117 aaKnown RBP27.86■■■□□ 2.05
CBX4-201ENST00000269397 FBXO47Q5MNV8 452 aa27.86■■■□□ 2.05
CBX4-201ENST00000269397 ZNF280DQ6N043 979 aa27.86■■■□□ 2.05
CBX4-201ENST00000269397 LAYNQ6UX15 382 aa27.86■■■□□ 2.05
CBX4-201ENST00000269397 CRYBG2Q8N1P7 616 aa27.86■■■□□ 2.05
CBX4-201ENST00000269397 PPP1R1BQ9UD71 204 aaPredicted RBP27.86■■■□□ 2.05
CBX4-201ENST00000269397 VTI1BQ9UEU0 232 aa27.86■■■□□ 2.05
CBX4-201ENST00000269397 TRIM38O00635 465 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 HOXA11P31270 313 aaPredicted RBP27.85■■■□□ 2.05
CBX4-201ENST00000269397 NOS2P35228 1153 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 HSPA13P48723 471 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 TPI1P60174 286 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 NOL9Q5SY16 702 aaKnown RBP27.85■■■□□ 2.05
CBX4-201ENST00000269397 OTOP3Q7RTS5 596 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 MFSD6LQ8IWD5 586 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 CHERPQ8IWX8 916 aaKnown RBP27.85■■■□□ 2.05
CBX4-201ENST00000269397 DDI1Q8WTU0 396 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 SLC29A1Q99808 456 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 GBA3Q9H227 469 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 A0A0J9YVX5 310 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 ARHGEF37A1IGU5 675 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 C9IYK1 514 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 IRF6O14896 467 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 DAB1O75553 588 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 PGK1P00558 417 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 JCHAINP01591 159 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 ARHGAP1Q07960 439 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 ZBTB6Q15916 424 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 DALRD3Q5D0E6 543 aaKnown RBP27.85■■■□□ 2.05
CBX4-201ENST00000269397 NUP93Q8N1F7 819 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 CNTD1Q8N815 330 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 GAB3Q8WWW8 586 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 CELF6Q96J87 481 aaKnown RBP27.85■■■□□ 2.05
CBX4-201ENST00000269397 CIB1Q99828 191 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 TRPC7Q9HCX4 862 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 MRPL42Q9Y6G3 142 aaKnown RBP27.85■■■□□ 2.05
CBX4-201ENST00000269397 TARM1B6A8C7 271 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 SDHDO14521 159 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 SLC12A1Q13621 1099 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 USP41Q3LFD5 358 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 MTX3Q5HYI7 312 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 FAM43BQ6ZT52 329 aaPredicted RBP27.85■■■□□ 2.05
CBX4-201ENST00000269397 LRRC52Q8N7C0 313 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 RDH11Q8TC12 318 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 WNT8BQ93098 351 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 ABTB1Q969K4 478 aaPredicted RBP27.85■■■□□ 2.05
CBX4-201ENST00000269397 RHOJQ9H4E5 214 aa27.85■■■□□ 2.05
CBX4-201ENST00000269397 ADRA1BP35368 520 aa27.84■■■□□ 2.05
CBX4-201ENST00000269397 HERC3Q15034 1050 aa27.84■■■□□ 2.05
CBX4-201ENST00000269397 CNSTQ6PJW8 725 aa27.84■■■□□ 2.05
CBX4-201ENST00000269397 CYP4F12Q9HCS2 524 aa27.84■■■□□ 2.05
CBX4-201ENST00000269397 CCDC167Q9P0B6 97 aa27.84■■■□□ 2.05
CBX4-201ENST00000269397 ACOT9Q9Y305 439 aa27.84■■■□□ 2.05
CBX4-201ENST00000269397 TLL2Q9Y6L7 1015 aa27.84■■■□□ 2.05
CBX4-201ENST00000269397 NRP1O14786 923 aa27.84■■■□□ 2.05
CBX4-201ENST00000269397 IKBKEQ14164 716 aa27.84■■■□□ 2.05
CBX4-201ENST00000269397 POU6F1Q14863 301 aa27.84■■■□□ 2.05
CBX4-201ENST00000269397 PPP1R3AQ16821 1122 aa27.84■■■□□ 2.05
CBX4-201ENST00000269397 SPATA22Q8NHS9 363 aa27.84■■■□□ 2.05
CBX4-201ENST00000269397 ASB9Q96DX5 294 aa27.84■■■□□ 2.05
CBX4-201ENST00000269397 TMEM79Q9BSE2 394 aa27.84■■■□□ 2.05
CBX4-201ENST00000269397 FAM49AQ9H0Q0 323 aaPredicted RBP27.84■■■□□ 2.05
CBX4-201ENST00000269397 DNAAF2Q9NVR5 837 aaKnown RBP27.84■■■□□ 2.05
CBX4-201ENST00000269397 GMPR2Q9P2T1 348 aaKnown RBP27.84■■■□□ 2.05
CBX4-201ENST00000269397 ANKRD6Q9Y2G4 727 aa27.84■■■□□ 2.05
CBX4-201ENST00000269397 PLOD2O00469 737 aa27.83■■■□□ 2.05
CBX4-201ENST00000269397 SLC22A2O15244 555 aa27.83■■■□□ 2.05
CBX4-201ENST00000269397 RECQL4O94761 1208 aa27.83■■■□□ 2.05
CBX4-201ENST00000269397 MT-CO1P00395 513 aa27.83■■■□□ 2.05
CBX4-201ENST00000269397 CAPNS1P04632 268 aa27.83■■■□□ 2.05
CBX4-201ENST00000269397 CDH15P55291 814 aa27.83■■■□□ 2.05
CBX4-201ENST00000269397 PPIDQ08752 370 aaKnown RBP27.83■■■□□ 2.05
CBX4-201ENST00000269397 TRIM25Q14258 630 aaKnown RBP27.83■■■□□ 2.05
CBX4-201ENST00000269397 KLC3Q6P597 504 aa27.83■■■□□ 2.05
CBX4-201ENST00000269397 TXNDC5Q8NBS9 432 aaKnown RBP27.83■■■□□ 2.05
CBX4-201ENST00000269397 HMGCLL1Q8TB92 370 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms