RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 PIP4K2CQ8TBX8 421 aa22.47■■□□□ 1.19
CDR2-201ENST00000268383 NCSTNQ92542 709 aa22.47■■□□□ 1.19
CDR2-201ENST00000268383 SEMA6AQ9H2E6 1030 aa22.47■■□□□ 1.19
CDR2-201ENST00000268383 CYP4F12Q9HCS2 524 aa22.47■■□□□ 1.19
CDR2-201ENST00000268383 VTA1Q9NP79 307 aa22.47■■□□□ 1.19
CDR2-201ENST00000268383 RIMS3Q9UJD0 308 aa22.47■■□□□ 1.19
CDR2-201ENST00000268383 FBXW11Q9UKB1 542 aa22.47■■□□□ 1.19
CDR2-201ENST00000268383 C9IYK1 514 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 DFFAO00273 331 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 GJA9P57773 515 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 DAOAP59103 153 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 ART3Q13508 389 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 SV2CQ496J9 727 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.46■■□□□ 1.19
CDR2-201ENST00000268383 UBXN11Q5T124 520 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 IL31Q6EBC2 164 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 LRRC8EQ6NSJ5 796 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 RWDD4Q6NW29 188 aaKnown RBP22.46■■□□□ 1.19
CDR2-201ENST00000268383 RNF135Q8IUD6 432 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 RP9Q8TA86 221 aaKnown RBP22.46■■□□□ 1.19
CDR2-201ENST00000268383 GRIP2Q9C0E4 1043 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 TNFRSF12AQ9NP84 129 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 TTC3P53804 2025 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 CCDC160A6NGH7 325 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 MT-CO1P00395 513 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 TFAP2AP05549 437 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 FAM200BP0CF97 657 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 SMIM10L2AP0DMW4 78 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 SMIM10L2BP0DMW5 78 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 ADGRE1Q14246 886 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 TEKT5Q96M29 485 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 IL22Q9GZX6 179 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 PCDHAC1Q9H158 963 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 LZTS1Q9Y250 596 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 IPPQ9Y573 584 aa22.46■■□□□ 1.19
CDR2-201ENST00000268383 KCNU1A8MYU2 1149 aa22.45■■□□□ 1.19
CDR2-201ENST00000268383 DYNC1LI2O43237 492 aaPredicted RBP22.45■■□□□ 1.19
CDR2-201ENST00000268383 NELFEP18615 380 aaKnown RBP22.45■■□□□ 1.19
CDR2-201ENST00000268383 CSE1LP55060 971 aaKnown RBP22.45■■□□□ 1.19
CDR2-201ENST00000268383 XIAPP98170 497 aa22.45■■□□□ 1.19
CDR2-201ENST00000268383 SLC5A9Q2M3M2 681 aa22.45■■□□□ 1.19
CDR2-201ENST00000268383 NOMO2Q5JPE7 1267 aa22.45■■□□□ 1.19
CDR2-201ENST00000268383 SH2D4BQ5SQS7 431 aa22.45■■□□□ 1.19
CDR2-201ENST00000268383 RBM44Q6ZP01 1051 aaKnown RBP22.45■■□□□ 1.19
CDR2-201ENST00000268383 CNDP1Q96KN2 507 aa22.45■■□□□ 1.19
CDR2-201ENST00000268383 SERPINI1Q99574 410 aa22.45■■□□□ 1.19
CDR2-201ENST00000268383 COLEC11Q9BWP8 271 aa22.45■■□□□ 1.19
CDR2-201ENST00000268383 GNEQ9Y223 722 aaKnown RBP22.45■■□□□ 1.19
CDR2-201ENST00000268383 PLK1P53350 603 aa22.45■■□□□ 1.18
CDR2-201ENST00000268383 MYBPC1Q00872 1141 aa22.45■■□□□ 1.18
CDR2-201ENST00000268383 DGKDQ16760 1214 aa22.45■■□□□ 1.18
CDR2-201ENST00000268383 STYXQ8WUJ0 223 aa22.45■■□□□ 1.18
CDR2-201ENST00000268383 PCED1BQ96HM7 432 aa22.45■■□□□ 1.18
CDR2-201ENST00000268383 TSNARE1Q96NA8 513 aa22.45■■□□□ 1.18
CDR2-201ENST00000268383 BTBD9Q96Q07 612 aa22.45■■□□□ 1.18
CDR2-201ENST00000268383 EPAS1Q99814 870 aa22.45■■□□□ 1.18
CDR2-201ENST00000268383 RHOJQ9H4E5 214 aa22.45■■□□□ 1.18
CDR2-201ENST00000268383 ZNF385DQ9H6B1 395 aa22.45■■□□□ 1.18
CDR2-201ENST00000268383 GTSE1Q9NYZ3 720 aa22.45■■□□□ 1.18
CDR2-201ENST00000268383 ADA2Q9NZK5 511 aa22.45■■□□□ 1.18
CDR2-201ENST00000268383 C6orf203Q9P0P8 240 aaPredicted RBP22.45■■□□□ 1.18
CDR2-201ENST00000268383 PDCD11Q14690 1871 aaKnown RBP22.45■■□□□ 1.18
CDR2-201ENST00000268383 PEX1O43933 1283 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 TRPA1O75762 1119 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 DDHD2O94830 711 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 CSPG5O95196 566 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 FGFR3P22607 806 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 CDH17Q12864 832 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 PRKAA1Q13131 559 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 PPIL2Q13356 520 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 SNX17Q15036 470 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 NRF1Q16656 503 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 ARMC3Q5W041 872 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 PDZD4Q76G19 769 aaPredicted RBP22.44■■□□□ 1.18
CDR2-201ENST00000268383 TXNDC5Q8NBS9 432 aaKnown RBP22.44■■□□□ 1.18
CDR2-201ENST00000268383 SMG8Q8ND04 991 aaKnown RBP22.44■■□□□ 1.18
CDR2-201ENST00000268383 MPP4Q96JB8 637 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 HAPLN3Q96S86 360 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 PRPF18Q99633 342 aaKnown RBP22.44■■□□□ 1.18
CDR2-201ENST00000268383 WDCPQ9H6R7 721 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 ZBTB26Q9HCK0 441 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 PRPF19Q9UMS4 504 aaKnown RBP22.44■■□□□ 1.18
CDR2-201ENST00000268383 MYLKQ15746 1914 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 TCAF2A6NFQ2 919 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 TARM1B6A8C7 271 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 PTGESO14684 152 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 TREHO43280 583 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 RNASEH2AO75792 299 aaKnown RBP22.44■■□□□ 1.18
CDR2-201ENST00000268383 PIM1P11309 404 aaPredicted RBP22.44■■□□□ 1.18
CDR2-201ENST00000268383 CHRNA4P43681 627 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 NPY2RP49146 381 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 LSAMPQ13449 338 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 CNSTQ6PJW8 725 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 KDM1BQ8NB78 822 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 GPRC5AQ8NFJ5 357 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 ATP6V1E2Q96A05 226 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 HDAC11Q96DB2 347 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 CABYRO75952 493 aa22.44■■□□□ 1.18
CDR2-201ENST00000268383 WARSP23381 471 aaKnown RBP22.44■■□□□ 1.18
CDR2-201ENST00000268383 RPS6KA3P51812 740 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms