RNA–Protein interactions for RNA: ENSMUST00000080461.11

Lig3-202, Transcript of DNA ligase 3, mousemouse

TSL 5 BASIC

Gene Lig3, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-202ENSMUST00000080461 Adam17Q9Z0F8 827 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Smok3aC0HKC8 504 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Smok3bC0HKC9 504 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Cyp2j6O54750 501 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Sbk3P0C5K0 361 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Olfr464Q5SW48 313 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 HiraQ61666 1015 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Cox8aQ64445 69 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Maml1Q6T264 1020 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Paqr9Q6TCG2 375 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Stk38lQ7TSE6 464 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Ric8bQ80XE1 520 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Ppp1r12bQ8BG95 976 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Msantd1Q8BIL2 278 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Ythdf3Q8BYK6 585 aaKnown RBP12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Rwdd4Q9CPR1 188 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 MrgbpQ9DAT2 204 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Kdelc1Q9JHP7 502 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 C1qtnf1Q9QXP7 281 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Zfp839E9PUU5 921 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Fgf18O89101 207 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Atxn10P28658 475 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Mc1rQ01727 315 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Gbp8Q2V6D6 525 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 E330034G19RikQ3UWX6 351 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 H2-Q2Q4KN81 360 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Fam189bQ5HZJ5 669 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Nomo1Q6GQT9 1214 aaKnown RBP12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Pnma8aQ80VM8 430 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Trerf1Q8BXJ2 1205 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Lrrc42Q8R2U7 421 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Olfr847Q8VFF4 312 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Olfr1353Q8VGU8 309 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Pcdhb13Q91Y06 796 aa12.6□□□□□ -0.39
Lig3-202ENSMUST00000080461 Trbv4A0A075B5I2 113 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Gm28360A0A087WR25 190 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Dhx35A2ACQ1 703 aaKnown RBP12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Gm5930D3Z257 264 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Usp2O88623 613 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 LdhcP00342 332 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 P01670 111 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 P01671 111 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 P01672 111 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Psen1P49769 467 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 NcanP55066 1268 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Hnrnph2P70333 449 aaKnown RBP12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Lypla1P97823 230 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 ItkQ03526 625 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Lmf1Q3U3R4 574 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Lrrc47Q505F5 581 aaKnown RBP12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Arnt2Q61324 712 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Arl13bQ640N2 427 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 TCAIMQ66JZ4 499 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Galnt10Q6P9S7 603 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Slc39a4Q78IQ7 660 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 FsbpQ8BKE5 299 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Acad9Q8JZN5 625 aaKnown RBP12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Ipo11Q8K2V6 975 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Gtse1Q8R080 741 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Acot13Q9CQR4 140 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Alg14Q9D081 217 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Mrps9Q9D7N3 390 aaKnown RBP12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 PllpQ9DCU2 182 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Mpp6Q9JLB0 553 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Nup205A0A0J9YUD5 2061 aaKnown RBP12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Gm6370A0A0G2JGX9 315 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Gm6309L7N481 315 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Gpr3P35413 330 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Lcp1Q61233 627 aaKnown RBP12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Tdpoz3Q717B4 365 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Rbm22Q8BHS3 420 aaKnown RBP12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Noc4lQ8BHY2 516 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Shc2Q8BMC3 573 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Tbc1d17Q8BYH7 645 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Tmem259Q8CIV2 574 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Pacs1Q8K212 961 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Rprd1aQ8VDS4 312 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Emid1Q91VF5 444 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 4930550L24RikQ99PA7 320 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Ssu72Q9CY97 194 aaKnown RBP12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Efcab9Q9DAM2 216 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 MkksQ9JI70 570 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Trpc4Q9QUQ5 974 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Chrna6Q9R0W9 494 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Plxna4Q80UG2 1893 aa12.59□□□□□ -0.39
Lig3-202ENSMUST00000080461 Gnat1P20612 350 aa12.58□□□□□ -0.39
Lig3-202ENSMUST00000080461 Folr1P35846 255 aa12.58□□□□□ -0.39
Lig3-202ENSMUST00000080461 Sar1aP36536 198 aa12.58□□□□□ -0.39
Lig3-202ENSMUST00000080461 Cdh6P97326 790 aa12.58□□□□□ -0.39
Lig3-202ENSMUST00000080461 Cd6Q61003 665 aa12.58□□□□□ -0.39
Lig3-202ENSMUST00000080461 Itm2aQ61500 263 aa12.58□□□□□ -0.39
Lig3-202ENSMUST00000080461 Chsy1Q6ZQ11 800 aa12.58□□□□□ -0.39
Lig3-202ENSMUST00000080461 Casd1Q7TN73 797 aa12.58□□□□□ -0.39
Lig3-202ENSMUST00000080461 Proser3Q7TSA6 634 aa12.58□□□□□ -0.39
Lig3-202ENSMUST00000080461 Cabs1Q8C633 391 aa12.58□□□□□ -0.39
Lig3-202ENSMUST00000080461 Ccdc63Q8CDV6 558 aa12.58□□□□□ -0.39
Lig3-202ENSMUST00000080461 Rps6kl1Q8R2S1 544 aa12.58□□□□□ -0.39
Lig3-202ENSMUST00000080461 Psmd9Q9CR00 222 aa12.58□□□□□ -0.39
Lig3-202ENSMUST00000080461 Tmem135Q9CYV5 458 aa12.58□□□□□ -0.39
Lig3-202ENSMUST00000080461 DtnaQ9D2N4 746 aa12.58□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms