RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 C6orf62Q9GZU0 229 aaPredicted RBP14.91□□□□□ -0.02
HNRNPU-226ENST00000640218 ZFYVE1Q9HBF4 777 aa14.91□□□□□ -0.02
HNRNPU-226ENST00000640218 RXRGP48443 463 aa14.91□□□□□ -0.02
HNRNPU-226ENST00000640218 MRPS6P82932 125 aaKnown RBP14.91□□□□□ -0.02
HNRNPU-226ENST00000640218 MSLNQ13421 630 aaPredicted RBP14.91□□□□□ -0.02
HNRNPU-226ENST00000640218 HECTD3Q5T447 861 aa14.91□□□□□ -0.02
HNRNPU-226ENST00000640218 ABL2P42684 1182 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 ZNF143P52747 638 aaPredicted RBP14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 STX4Q12846 297 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 TSNQ15631 228 aaKnown RBP14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 EML3Q32P44 896 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 PAGE2BQ5JRK9 111 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 GJC2Q5T442 439 aaPredicted RBP14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 RSBN1Q5VWQ0 802 aaPredicted RBP14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 SELENOMQ8WWX9 145 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 LPPQ93052 612 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 LRRC39Q96DD0 335 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 RMND5BQ96G75 393 aaPredicted RBP14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 PPP1R16AQ96I34 528 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.9□□□□□ -0.024e-8■□□□□ 9
HNRNPU-226ENST00000640218 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.9□□□□□ -0.023e-9■■□□□ 11.9
HNRNPU-226ENST00000640218 TNFSF13BQ9Y275 285 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 LRRIQ1Q96JM4 1722 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 TRIM43BA6NCK2 446 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 WTIPA6NIX2 430 aaPredicted RBP14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 KCNH1O95259 989 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 BCL10O95999 233 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 MYL12AP19105 171 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 HK2P52789 917 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 ATP12AP54707 1039 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 PFKPQ01813 784 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 SAMD4BQ5PRF9 694 aaKnown RBP14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 ZBTB10Q96DT7 871 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 SLC25A23Q9BV35 468 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 WDR18Q9BV38 432 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 RABGEF1Q9UJ41 708 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 SMIM31A0A1B0GVY4 71 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 OPLAHO14841 1288 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 LTA4HP09960 611 aaKnown RBP14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 FGFR3P22607 806 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 SNRPD1P62314 119 aaKnown RBP14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 FKBP1CQ5VVH2 108 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 C11orf88Q6PI97 169 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 UNC5AQ6ZN44 842 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 TSEN2Q8NCE0 465 aaKnown RBP14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 SKA1Q96BD8 255 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 SNRNP25Q9BV90 132 aaKnown RBP14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 RAB21Q9UL25 225 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 CCNB1P14635 433 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 THOP1P52888 689 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 PRKAG1P54619 331 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 SPIDRQ14159 915 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 PDZK1Q5T2W1 519 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 SNX30Q5VWJ9 437 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 STARD8Q92502 1023 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 UROC1Q96N76 676 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 ACO2Q99798 780 aaKnown RBP14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 TBL1XO60907 577 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 GTF2BQ00403 316 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 GRIK5Q16478 980 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 STXBP5Q5T5C0 1151 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 LRRC74BQ6ZQY2 392 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 PCDH20Q8N6Y1 951 aaKnown RBP14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 COL26A1Q96A83 441 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 C18orf25Q96B23 403 aaPredicted RBP14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 CORO1BQ9BR76 489 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 TM6SF2Q9BZW4 377 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 CDH9Q9ULB4 789 aa14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 TNPO3Q9Y5L0 923 aaKnown RBP14.9□□□□□ -0.02
HNRNPU-226ENST00000640218 BCL9O00512 1426 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 ASTN1O14525 1302 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 CYP1A2P05177 515 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 GNA13Q14344 377 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 PRR23BQ6ZRT6 265 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 KRT77Q7Z794 578 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 STAG3L4Q8TBR4 150 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 HELQQ8TDG4 1101 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 HAS1Q92839 578 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 NRDE2Q9H7Z3 1164 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 GNPTGQ9UJJ9 305 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 ANXA5P08758 320 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 CRATP43155 626 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 DDR1Q08345 913 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 ATP13A4Q4VNC1 1196 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 ARMC4Q5T2S8 1044 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 FLCNQ8NFG4 579 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 ZNF558Q96NG5 402 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 ARHGEF3Q9NR81 526 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 PREX1Q8TCU6 1659 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 DEPDC5O75140 1603 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 IQGAP1P46940 1657 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 MEIS2O14770 477 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 HDCP19113 662 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 ZFP1Q6P2D0 407 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 ZDHHC13Q8IUH4 622 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 MKL1Q969V6 931 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 C19orf60Q96EN9 201 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 C1orf232A0A0U1RR37 186 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 IRF6O14896 467 aa14.89□□□□□ -0.03
HNRNPU-226ENST00000640218 ZW10O43264 779 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms