RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 CENPCQ03188 943 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 ENPEPQ07075 957 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 SRSF6Q13247 344 aaKnown RBP11.39□□□□□ -0.59
CASC3-208ENST00000583649 NADSYN1Q6IA69 706 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 Q6ZVU0 165 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 BHLHA9Q7RTU4 235 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 DTX1Q86Y01 620 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 FSTL5Q8N475 847 aaPredicted RBP11.39□□□□□ -0.59
CASC3-208ENST00000583649 EFCAB3Q8N7B9 438 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 ATP6V0D2Q8N8Y2 350 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 ATP11CQ8NB49 1132 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 CCDC112Q8NEF3 446 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 TAS1R2Q8TE23 839 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 USP7Q93009 1102 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 BMFQ96LC9 184 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 LENG8Q96PV6 779 aaPredicted RBP11.39□□□□□ -0.59
CASC3-208ENST00000583649 EFHD1Q9BUP0 239 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 C1QTNF7Q9BXJ2 289 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 APOBEC3GQ9HC16 384 aaKnown RBP11.39□□□□□ -0.59
CASC3-208ENST00000583649 GPR27Q9NS67 375 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 DMAC2Q9NW81 257 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 VPS28Q9UK41 221 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 MORC2Q9Y6X9 1032 aaPredicted RBP11.39□□□□□ -0.59
CASC3-208ENST00000583649 LRRK2Q5S007 2527 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 A0A087X0B3 334 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 POM121BA6NF01 834 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 PDXKO00764 312 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 NEMP1O14524 444 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 SLC2A3P11169 496 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 CTSEP14091 401 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 TACR2P21452 398 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 RPL13P26373 211 aaKnown RBP11.38□□□□□ -0.59
CASC3-208ENST00000583649 ELAVL4P26378 380 aaKnown RBP11.38□□□□□ -0.59
CASC3-208ENST00000583649 GTF2H1P32780 548 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 NOP2P46087 812 aaKnown RBP11.38□□□□□ -0.59
CASC3-208ENST00000583649 CD97P48960 835 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 NEK3P51956 506 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 KLRB1Q12918 225 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 RABEP1Q15276 862 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 TMEM259Q4ZIN3 620 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 RAP1GAP2Q684P5 730 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 KRT39Q6A163 491 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 B3GNT8Q7Z7M8 397 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 HEATR4Q86WZ0 1026 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 ZFAND4Q86XD8 727 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 GKN2Q86XP6 184 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 PHACTR4Q8IZ21 702 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 CCAR2Q8N163 923 aaKnown RBP11.38□□□□□ -0.59
CASC3-208ENST00000583649 SH2D3CQ8N5H7 860 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 TEX19Q8NA77 164 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 DENND6BQ8NEG7 585 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 SSC4DQ8WTU2 575 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 HTR3CQ8WXA8 447 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 CCDC74AQ96AQ1 378 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 TMX3Q96JJ7 454 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 PPP1R13BQ96KQ4 1090 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 EPAS1Q99814 870 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 C2orf49Q9BVC5 232 aaPredicted RBP11.38□□□□□ -0.59
CASC3-208ENST00000583649 SLC12A9Q9BXP2 914 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 LRRN3Q9H3W5 708 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 MMRN2Q9H8L6 949 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 TMEM8AQ9HCN3 771 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 ZNF71Q9NQZ8 489 aaPredicted RBP11.38□□□□□ -0.59
CASC3-208ENST00000583649 CUEDC1Q9NWM3 386 aaPredicted RBP11.38□□□□□ -0.59
CASC3-208ENST00000583649 FAM13BQ9NYF5 915 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 IL36AQ9UHA7 158 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 PLAAQ9Y263 795 aa11.38□□□□□ -0.59
CASC3-208ENST00000583649 YY2O15391 372 aa11.37□□□□□ -0.59
CASC3-208ENST00000583649 CNTN5O94779 1100 aa11.37□□□□□ -0.59
CASC3-208ENST00000583649 VDRP11473 427 aa11.37□□□□□ -0.59
CASC3-208ENST00000583649 CLCN6P51797 869 aa11.37□□□□□ -0.59
CASC3-208ENST00000583649 COPB1P53618 953 aaKnown RBP11.37□□□□□ -0.59
CASC3-208ENST00000583649 YPEL5P62699 121 aa11.37□□□□□ -0.59
CASC3-208ENST00000583649 CCL7P80098 99 aa11.37□□□□□ -0.59
CASC3-208ENST00000583649 PPARDQ03181 441 aa11.37□□□□□ -0.59
CASC3-208ENST00000583649 DRAP1Q14919 205 aaPredicted RBP11.37□□□□□ -0.59
CASC3-208ENST00000583649 SLC39A14Q15043 492 aa11.37□□□□□ -0.59
CASC3-208ENST00000583649 STILQ15468 1287 aa11.37□□□□□ -0.59
CASC3-208ENST00000583649 LACTB2Q53H82 288 aaPredicted RBP11.37□□□□□ -0.59
CASC3-208ENST00000583649 PHF19Q5T6S3 580 aa11.37□□□□□ -0.59
CASC3-208ENST00000583649 SEL1L3Q68CR1 1132 aa11.37□□□□□ -0.59
CASC3-208ENST00000583649 UBA3Q8TBC4 463 aa11.37□□□□□ -0.59
CASC3-208ENST00000583649 KIAA1143Q96AT1 154 aaPredicted RBP11.37□□□□□ -0.59
CASC3-208ENST00000583649 MIB2Q96AX9 1013 aa11.37□□□□□ -0.59
CASC3-208ENST00000583649 ARHGEF26Q96DR7 871 aa11.37□□□□□ -0.59
CASC3-208ENST00000583649 FCRL2Q96LA5 508 aaPredicted RBP11.37□□□□□ -0.59
CASC3-208ENST00000583649 FEM1AQ9BSK4 669 aa11.37□□□□□ -0.59
CASC3-208ENST00000583649 CDH19Q9H159 772 aa11.37□□□□□ -0.59
CASC3-208ENST00000583649 MUC3BQ9H195 1237 aa11.37□□□□□ -0.59
CASC3-208ENST00000583649 EXOC1Q9NV70 894 aa11.37□□□□□ -0.59
CASC3-208ENST00000583649 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.37□□□□□ -0.59
CASC3-208ENST00000583649 GGT7Q9UJ14 662 aa11.37□□□□□ -0.59
CASC3-208ENST00000583649 ZFR2Q9UPR6 939 aaKnown RBP11.37□□□□□ -0.59
CASC3-208ENST00000583649 TDRD6O60522 2096 aaKnown RBP11.36□□□□□ -0.59
CASC3-208ENST00000583649 TULP2O00295 520 aa11.36□□□□□ -0.59
CASC3-208ENST00000583649 TSPAN6O43657 245 aa11.36□□□□□ -0.59
CASC3-208ENST00000583649 PDIA4P13667 645 aaKnown RBP11.36□□□□□ -0.59
CASC3-208ENST00000583649 ITIH1P19827 911 aa11.36□□□□□ -0.59
CASC3-208ENST00000583649 MC1RQ01726 317 aa11.36□□□□□ -0.59
CASC3-208ENST00000583649 C1orf61Q13536 156 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms