RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 EID2Q8N6I1 236 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 NEK11Q8NG66 645 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 RXFP2Q8WXD0 754 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 IFT43Q96FT9 208 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 HEPHQ9BQS7 1158 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 MAGEH1Q9H213 219 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 GANQ9H2C0 597 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 METTL5Q9NRN9 209 aaKnown RBP12.72□□□□□ -0.37
COL6A1-205ENST00000492851 FAM207AQ9NSI2 230 aaPredicted RBP12.72□□□□□ -0.37
COL6A1-205ENST00000492851 KLHL11Q9NVR0 708 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 FANCLQ9NW38 375 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 DONSONQ9NYP3 566 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 HS3ST3A1Q9Y663 406 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 TRABD2BA6NFA1 517 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 NEMP2A6NFY4 417 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 ZSCAN5CA6NGD5 496 aaPredicted RBP12.71□□□□□ -0.37
COL6A1-205ENST00000492851 LRRC10BA6NIK2 292 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 TAF4O00268 1085 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 PLK4O00444 970 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 SMAD6O43541 496 aaKnown RBP12.71□□□□□ -0.37
COL6A1-205ENST00000492851 LEFTY1O75610 366 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 ZMPSTE24O75844 475 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 PCDH8O95206 1070 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 CTSLP07711 333 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 THEGLP0DJG4 465 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 UNGP13051 313 aaPredicted RBP12.71□□□□□ -0.37
COL6A1-205ENST00000492851 CKMT2P17540 419 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 ITGB7P26010 798 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 L1CAMP32004 1257 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 NEK3P51956 506 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 METAP1P53582 386 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 AIF1P55008 147 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 GSCP56915 257 aaPredicted RBP12.71□□□□□ -0.37
COL6A1-205ENST00000492851 RPS21P63220 83 aaKnown RBP12.71□□□□□ -0.37
COL6A1-205ENST00000492851 E2F1Q01094 437 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 FMO1Q01740 532 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 POLD3Q15054 466 aaPredicted RBP12.71□□□□□ -0.37
COL6A1-205ENST00000492851 POM121L1PQ3SYA9 428 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 CCDC14Q49A88 953 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 C2CD6Q53TS8 623 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 CCDC157Q569K6 752 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 SFMBT2Q5VUG0 894 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 RWDD4Q6NW29 188 aaKnown RBP12.71□□□□□ -0.37
COL6A1-205ENST00000492851 FBXL19Q6PCT2 694 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 DHRS13Q6UX07 377 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 LINGO4Q6UY18 593 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 DPY19L3Q6ZPD9 716 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 RBM43Q6ZSC3 357 aaKnown RBP12.71□□□□□ -0.37
COL6A1-205ENST00000492851 SPATS2Q86XZ4 545 aaKnown RBP12.71□□□□□ -0.37
COL6A1-205ENST00000492851 CACTIN-AS1Q8N1I8 211 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 EMC1Q8N766 993 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 TMEM145Q8NBT3 493 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 OR7D4Q8NG98 312 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 TSC1Q92574 1164 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 CENPIQ92674 756 aaPredicted RBP12.71□□□□□ -0.37
COL6A1-205ENST00000492851 RAB7BQ96AH8 199 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 ARHGEF26Q96DR7 871 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 SELENOOQ9BVL4 669 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 NLRC4Q9NPP4 1024 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 EVA1BQ9NVM1 165 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 ADAM22Q9P0K1 906 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 ZNF212Q9UDV6 495 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 LIMA1Q9UHB6 759 aaKnown RBP12.71□□□□□ -0.37
COL6A1-205ENST00000492851 LHX6Q9UPM6 363 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 SNX10Q9Y5X0 201 aa12.71□□□□□ -0.37
COL6A1-205ENST00000492851 AKAP13Q12802 2813 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 C2CD4BA6NLJ0 364 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 RIOK3O14730 519 aaKnown RBP12.7□□□□□ -0.38
COL6A1-205ENST00000492851 SLC31A1O15431 190 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 TSPAN6O43657 245 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 AP1G1O43747 822 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 RAMP2O60895 175 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 ALPPL2P10696 532 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 CHRNB2P17787 502 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 DNA2P51530 1060 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 COPB1P53618 953 aaKnown RBP12.7□□□□□ -0.38
COL6A1-205ENST00000492851 SNRPD1P62314 119 aaKnown RBP12.7□□□□□ -0.38
COL6A1-205ENST00000492851 MYL5Q02045 173 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 RAD51Q06609 339 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 BNIP3Q12983 259 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 ZNF211Q13398 564 aaPredicted RBP12.7□□□□□ -0.38
COL6A1-205ENST00000492851 CDO1Q16878 200 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 ZNF284Q2VY69 593 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 TRNP1Q6NT89 227 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 PHF13Q86YI8 300 aaPredicted RBP12.7□□□□□ -0.38
COL6A1-205ENST00000492851 DRC7Q8IY82 874 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 CHST14Q8NCH0 376 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 SLC20A1Q8WUM9 679 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 CASKIN2Q8WXE0 1202 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 NTAN1Q96AB6 310 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 ARRDC3Q96B67 414 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 TBC1D31Q96DN5 1066 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 C11orf70Q9BRQ4 267 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 OSBPL1AQ9BXW6 950 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 SLC17A9Q9BYT1 436 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 TNKS2Q9H2K2 1166 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 SCUBE2Q9NQ36 999 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 TMEM248Q9NWD8 314 aa12.7□□□□□ -0.38
COL6A1-205ENST00000492851 HECAQ9UBI9 543 aaPredicted RBP12.7□□□□□ -0.38
COL6A1-205ENST00000492851 CHD6Q8TD26 2715 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms