RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 CD300LGQ6UXG3 332 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 C14orf80Q86SX3 495 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 TDRD5Q8NAT2 981 aaKnown RBP10.99□□□□□ -0.65
VPS52-217ENST00000478934 UPF1Q92900 1129 aaKnown RBP eCLIP10.99□□□□□ -0.65
VPS52-217ENST00000478934 GATA6Q92908 595 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 DNAI2Q9GZS0 605 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 BRD8Q9H0E9 1235 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 CDH22Q9UJ99 828 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 RUVBL2Q9Y230 463 aaKnown RBP10.99□□□□□ -0.65
VPS52-217ENST00000478934 MTF2Q9Y483 593 aaPredicted RBP10.99□□□□□ -0.65
VPS52-217ENST00000478934 C9IYK1 514 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 F8W8V4 182 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 CCL22O00626 93 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 BUD23O43709 281 aaKnown RBP10.98□□□□□ -0.65
VPS52-217ENST00000478934 LYNP07948 512 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 GRK2P25098 689 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 NAGLUP54802 743 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 AQP4P55087 323 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 GJA9P57773 515 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 DLG1Q12959 904 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 TRIM32Q13049 653 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 USP10Q14694 798 aaKnown RBP10.98□□□□□ -0.65
VPS52-217ENST00000478934 INSCQ1MX18 579 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 EPGNQ6UW88 154 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 PDZD4Q76G19 769 aaPredicted RBP10.98□□□□□ -0.65
VPS52-217ENST00000478934 ARHGAP12Q8IWW6 846 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 CASP10Q92851 521 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 SMARCD1Q96GM5 515 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 SCYL1Q96KG9 808 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 LENG8Q96PV6 779 aaPredicted RBP10.98□□□□□ -0.65
VPS52-217ENST00000478934 EPAS1Q99814 870 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 MCMBPQ9BTE3 642 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 FICDQ9BVA6 458 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 NUF2Q9BZD4 464 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 SLC39A8Q9C0K1 460 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 CDH19Q9H159 772 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 S100A14Q9HCY8 104 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 PCDHB12Q9Y5F1 795 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 NEMP2A6NFY4 417 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 TXNDC9O14530 226 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 B4GALT3O60512 393 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 PAGE1O75459 146 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 ARNTP27540 789 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 GRIA4P48058 902 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 TBL3Q12788 808 aaKnown RBP10.98□□□□□ -0.65
VPS52-217ENST00000478934 TAF1CQ15572 869 aaPredicted RBP10.98□□□□□ -0.65
VPS52-217ENST00000478934 CNGA3Q16281 694 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 PCSK7Q16549 785 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 ZNF789Q5FWF6 425 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 CST9Q5W186 159 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 PM20D1Q6GTS8 502 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 DENND5AQ6IQ26 1287 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 ZC3HC1Q86WB0 502 aaKnown RBP10.98□□□□□ -0.65
VPS52-217ENST00000478934 GPR152Q8TDT2 470 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 C1QTNF1Q9BXJ1 281 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 ACE2Q9BYF1 805 aaPredicted RBP10.98□□□□□ -0.65
VPS52-217ENST00000478934 VCXQ9H320 206 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 NMUR1Q9HB89 426 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 DNAJC28Q9NX36 388 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 ZDHHC2Q9UIJ5 367 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 CDH9Q9ULB4 789 aa10.98□□□□□ -0.65
VPS52-217ENST00000478934 TRIM13O60858 407 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 SLC35E2BP0CK96 405 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 ETS2P15036 469 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 RAG1P15918 1043 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 HCAR3P49019 387 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 CDK18Q07002 472 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 NAB1Q13506 487 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 LBRQ14739 615 aaKnown RBP10.97□□□□□ -0.65
VPS52-217ENST00000478934 CCDC153Q494R4 210 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 CMPK2Q5EBM0 449 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 ARL13AQ5H913 290 aaPredicted RBP10.97□□□□□ -0.65
VPS52-217ENST00000478934 ARTNQ5T4W7 220 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 CENPLQ8N0S6 344 aaPredicted RBP10.97□□□□□ -0.65
VPS52-217ENST00000478934 ISL2Q96A47 359 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 NXNL1Q96CM4 212 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 SUDS3Q9H7L9 328 aaPredicted RBP10.97□□□□□ -0.65
VPS52-217ENST00000478934 OXSMQ9NWU1 459 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 POMPQ9Y244 141 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 FIS1Q9Y3D6 152 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 AK5Q9Y6K8 562 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 CFLARO15519 480 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 GJB3O75712 270 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 KLHL2O95198 593 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 PIGNO95427 931 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 HLA-DQB2P05538 268 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 COX4I1P13073 169 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 HOXC8P31273 242 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 THPOP40225 353 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 GPR15P49685 360 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 MAXP61244 160 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 CDH17Q12864 832 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 KLF10Q13118 480 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 IL31Q6EBC2 164 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 RNF135Q8IUD6 432 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 FSTL5Q8N475 847 aaPredicted RBP10.97□□□□□ -0.65
VPS52-217ENST00000478934 C2orf69Q8N8R5 385 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 SNX31Q8N9S9 440 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 SH3RF2Q8TEC5 729 aa10.97□□□□□ -0.65
VPS52-217ENST00000478934 USP13Q92995 863 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms