RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 ESRP1Q6NXG1 681 aaKnown RBP9.59□□□□□ -0.87
TOP3A-203ENST00000469739 IRGCQ6NXR0 463 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 CD300LGQ6UXG3 332 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 ATPAF2Q8N5M1 289 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 PHC3Q8NDX5 983 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 ZSCAN18Q8TBC5 510 aaPredicted RBP9.59□□□□□ -0.87
TOP3A-203ENST00000469739 MIPOL1Q8TD10 442 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 CCDC124Q96CT7 223 aaKnown RBP9.59□□□□□ -0.87
TOP3A-203ENST00000469739 IFT43Q96FT9 208 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 NDNQ99608 321 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 PPP1R12CQ9BZL4 782 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 MTF2Q9Y483 593 aaPredicted RBP9.59□□□□□ -0.87
TOP3A-203ENST00000469739 PEX11AO75192 247 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 CNTN5O94779 1100 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 SORBS2O94875 1100 aaKnown RBP9.59□□□□□ -0.87
TOP3A-203ENST00000469739 PTDSS1P48651 473 aaKnown RBP9.59□□□□□ -0.87
TOP3A-203ENST00000469739 RPL34P49207 117 aaKnown RBP9.59□□□□□ -0.87
TOP3A-203ENST00000469739 GLUD2P49448 558 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 ATXN3P54252 364 aaPredicted RBP9.59□□□□□ -0.87
TOP3A-203ENST00000469739 TUSC3Q13454 348 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 PTPRCAPQ14761 206 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 KPNB1Q14974 876 aaKnown RBP9.59□□□□□ -0.87
TOP3A-203ENST00000469739 PAFAH1B3Q15102 231 aaKnown RBP9.59□□□□□ -0.87
TOP3A-203ENST00000469739 PCBP1Q15365 356 aaKnown RBP eCLIP9.59□□□□□ -0.87
TOP3A-203ENST00000469739 CTC1Q2NKJ3 1217 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 KHDC1Q4VXA5 237 aaKnown RBP9.59□□□□□ -0.87
TOP3A-203ENST00000469739 FOXB2Q5VYV0 432 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 RGS9BPQ6ZS82 235 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 PDZD4Q76G19 769 aaPredicted RBP9.59□□□□□ -0.87
TOP3A-203ENST00000469739 LIMS2Q7Z4I7 341 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 KCNMB4Q86W47 210 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.59□□□□□ -0.87
TOP3A-203ENST00000469739 THEM5Q8N1Q8 247 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 CFAP52Q8N1V2 620 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 TMEM86AQ8N2M4 240 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 SMC1BQ8NDV3 1235 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 WDR60Q8WVS4 1066 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 THTPAQ9BU02 230 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 OCEL1Q9H607 264 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 PNPLA8Q9NP80 782 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 TAS2R1Q9NYW7 299 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 FETUBQ9UGM5 382 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 GIT1Q9Y2X7 761 aa9.59□□□□□ -0.87
TOP3A-203ENST00000469739 TMEM88BA6NKF7 163 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 HACD1B0YJ81 288 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 E9PBE3 544 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 KLHL41O60662 606 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 ADAMTS4O75173 837 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 TADA2AO75478 443 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 FBXO21O94952 628 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 ARSAP15289 507 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 RPL17P18621 184 aaKnown RBP9.58□□□□□ -0.88
TOP3A-203ENST00000469739 SLC1A6P48664 564 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 PLK1P53350 603 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 SLC18A1P54219 525 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 EPHB1P54762 984 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 GRM3Q14832 879 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 CCDC6Q16204 474 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 MGAT5BQ3V5L5 792 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 FAM171A1Q5VUB5 890 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 ATG16L1Q676U5 607 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 FAM117BQ6P1L5 589 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 GLB1LQ6UWU2 654 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 SCD5Q86SK9 330 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 SLC41A1Q8IVJ1 513 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 UCMAQ8WVF2 138 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 LRRC39Q96DD0 335 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 NSL1Q96IY1 281 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 MARK4Q96L34 752 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 FAM193BQ96PV7 902 aaPredicted RBP9.58□□□□□ -0.88
TOP3A-203ENST00000469739 LRRC40Q9H9A6 602 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 GALNT8Q9NY28 637 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 ATXN10Q9UBB4 475 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 J3KR12 359 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 AP2A1O95782 977 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 MT-CO1P00395 513 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 CHRNGP07510 517 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 CPB1P15086 417 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 GSTT1P30711 240 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 SLC25A3Q00325 362 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 MPP3Q13368 585 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 USP10Q14694 798 aaKnown RBP9.58□□□□□ -0.88
TOP3A-203ENST00000469739 MBTPS1Q14703 1052 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 PABPC1LQ4VXU2 614 aaKnown RBP9.58□□□□□ -0.88
TOP3A-203ENST00000469739 TRIM42Q8IWZ5 723 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 PPP4R1Q8TF05 950 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 CYP2S1Q96SQ9 504 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 FSD1LQ9BXM9 530 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 LRMDAQ9H2I8 198 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 TASP1Q9H6P5 420 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 NT5MQ9NPB1 228 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 GMIPQ9P107 970 aa9.58□□□□□ -0.88
TOP3A-203ENST00000469739 GOLGA8CPA6NN73 597 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 PLIN3O60664 434 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 ATP6V1G1O75348 118 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 KRT36O76013 467 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 C2P06681 752 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 CRHR1P34998 444 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 MSX2P35548 267 aaPredicted RBP9.57□□□□□ -0.88
TOP3A-203ENST00000469739 GP5P40197 560 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms