RNA–Protein interactions for RNA: ENST00000409937.1

CNGA3-204, Transcript of cyclic nucleotide gated channel alpha 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CNGA3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA3-204ENST00000409937 LSMEM2Q8N112 164 aa14.31□□□□□ -0.12
CNGA3-204ENST00000409937 FSTL5Q8N475 847 aaPredicted RBP14.31□□□□□ -0.12
CNGA3-204ENST00000409937 NXNL1Q96CM4 212 aa14.31□□□□□ -0.12
CNGA3-204ENST00000409937 DNAJC1Q96KC8 554 aaKnown RBP14.31□□□□□ -0.12
CNGA3-204ENST00000409937 SIK2Q9H0K1 926 aa14.31□□□□□ -0.12
CNGA3-204ENST00000409937 GBA3Q9H227 469 aa14.31□□□□□ -0.12
CNGA3-204ENST00000409937 RCOR3Q9P2K3 495 aaPredicted RBP14.31□□□□□ -0.12
CNGA3-204ENST00000409937 TSC2P49815 1807 aa14.31□□□□□ -0.12
CNGA3-204ENST00000409937 C9IYK1 514 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 CXCL11O14625 94 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 AHSGP02765 367 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 SMIM18P0DKX4 95 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 SMIM10L2AP0DMW4 78 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 SMIM10L2BP0DMW5 78 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 DARSP14868 501 aaKnown RBP14.3□□□□□ -0.12
CNGA3-204ENST00000409937 TFEBP19484 476 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 FGFR3P22607 806 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 GJA9P57773 515 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 PAN2Q504Q3 1202 aaKnown RBP14.3□□□□□ -0.12
CNGA3-204ENST00000409937 RWDD4Q6NW29 188 aaKnown RBP14.3□□□□□ -0.12
CNGA3-204ENST00000409937 RNF135Q8IUD6 432 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 CNTD1Q8N815 330 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 IPMKQ8NFU5 416 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 NT5C3BQ969T7 300 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 ISL2Q96A47 359 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 KLHL32Q96NJ5 620 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 SMOQ99835 787 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 CENPKQ9BS16 269 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 FAM192AQ9GZU8 254 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 TNFRSF12AQ9NP84 129 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 TLK1Q9UKI8 766 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 DERAQ9Y315 318 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 NRCAMQ92823 1304 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 HDAC3O15379 428 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 DYNC1LI2O43237 492 aaPredicted RBP14.3□□□□□ -0.12
CNGA3-204ENST00000409937 DLX3O60479 287 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 VAPBO95292 243 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 YBX3P16989 372 aaKnown RBP eCLIP14.3□□□□□ -0.12
CNGA3-204ENST00000409937 CHRNA4P43681 627 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 RPL14P50914 215 aaKnown RBP14.3□□□□□ -0.12
CNGA3-204ENST00000409937 PLK1P53350 603 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 CDKL1Q00532 357 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 PPIDQ08752 370 aaKnown RBP14.3□□□□□ -0.12
CNGA3-204ENST00000409937 SNAPC2Q13487 334 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 UBXN11Q5T124 520 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 IYDQ6PHW0 289 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 BNC2Q6ZN30 1099 aaPredicted RBP14.3□□□□□ -0.12
CNGA3-204ENST00000409937 ZC3HC1Q86WB0 502 aaKnown RBP14.3□□□□□ -0.12
CNGA3-204ENST00000409937 PCDH20Q8N6Y1 951 aaKnown RBP14.3□□□□□ -0.12
CNGA3-204ENST00000409937 ZMIZ2Q8NF64 920 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 TNIP3Q96KP6 325 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 ZNF560Q96MR9 790 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 HNRNPABQ99729 332 aaKnown RBP14.3□□□□□ -0.12
CNGA3-204ENST00000409937 PKP2Q99959 881 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 TKTL2Q9H0I9 626 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 ADAM28Q9UKQ2 775 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 COL1A2P08123 1366 aa14.3□□□□□ -0.12
CNGA3-204ENST00000409937 PDCD11Q14690 1871 aaKnown RBP14.29□□□□□ -0.12
CNGA3-204ENST00000409937 LRIG2O94898 1065 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 MPOP05164 745 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 MYL4P12829 197 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 CHN2P52757 468 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 CCNA1P78396 465 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 CYLC2Q14093 348 aaPredicted RBP14.29□□□□□ -0.12
CNGA3-204ENST00000409937 ZNF423Q2M1K9 1284 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 TSTD2Q5T7W7 516 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 OGFRL1Q5TC84 451 aaPredicted RBP14.29□□□□□ -0.12
CNGA3-204ENST00000409937 ESRP1Q6NXG1 681 aaKnown RBP14.29□□□□□ -0.12
CNGA3-204ENST00000409937 BNIPLQ7Z465 357 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 KYQ8NBH2 561 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 SLC2A13Q96QE2 648 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 NDNQ99608 321 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 SEMA6AQ9H2E6 1030 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 GMPR2Q9P2T1 348 aaKnown RBP14.29□□□□□ -0.12
CNGA3-204ENST00000409937 KCNH4Q9UQ05 1017 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 IPPQ9Y573 584 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 TREHO43280 583 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 DNAJA2O60884 412 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 CRTAMO95727 393 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 FAM200BP0CF97 657 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 TSPAN8P19075 237 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 SCNN1AP37088 669 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 CNGA3Q16281 694 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 LIPMQ5VYY2 423 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 ZYG11AQ6WRX3 759 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 PIP4K2CQ8TBX8 421 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 NAT14Q8WUY8 206 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 GRIP2Q9C0E4 1043 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 PCDHAC1Q9H158 963 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 ZNF408Q9H9D4 720 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 WDR41Q9HAD4 459 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 SPON1Q9HCB6 807 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 GDAP2Q9NXN4 497 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 GTSE1Q9NYZ3 720 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 STK39Q9UEW8 545 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 OR12D3Q9UGF7 316 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 NUDT5Q9UKK9 219 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 RAP2CQ9Y3L5 183 aa14.29□□□□□ -0.12
CNGA3-204ENST00000409937 COPG1Q9Y678 874 aaKnown RBP14.29□□□□□ -0.12
CNGA3-204ENST00000409937 PLXNB2O15031 1838 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms