RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 GPR15P49685 360 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 BIKQ13323 160 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 NRF1Q16656 503 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 ITFG1Q8TB96 612 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 ZNF304Q9HCX3 659 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 ARHGEF28Q8N1W1 1705 aaKnown RBP14.5□□□□□ -0.09
TRAF1-201ENST00000373887 ATXN2Q99700 1313 aaKnown RBP14.5□□□□□ -0.09
TRAF1-201ENST00000373887 SSNA1O43805 119 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 ERCC2P18074 760 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 MGAT1P26572 445 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 CASP5P51878 434 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 PLK1P53350 603 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 HIRAP54198 1017 aaPredicted RBP14.5□□□□□ -0.09
TRAF1-201ENST00000373887 ZC3H12AQ5D1E8 599 aaKnown RBP14.5□□□□□ -0.09
TRAF1-201ENST00000373887 LRRC74BQ6ZQY2 392 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 PROX1Q92786 737 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 MRASO14807 208 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 TBL1XO60907 577 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 EIF4BP23588 611 aaKnown RBP14.5□□□□□ -0.09
TRAF1-201ENST00000373887 C15orf59Q2T9L4 293 aaPredicted RBP14.5□□□□□ -0.09
TRAF1-201ENST00000373887 GET4Q7L5D6 327 aaPredicted RBP14.5□□□□□ -0.09
TRAF1-201ENST00000373887 MILR1Q7Z6M3 343 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 KCNMB4Q86W47 210 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 PARP8Q8N3A8 854 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 SPATA20Q8TB22 786 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 TMEM159Q96B96 161 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 GRIP2Q9C0E4 1043 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 ADCY6O43306 1168 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 BUD23O43709 281 aaKnown RBP14.5□□□□□ -0.09
TRAF1-201ENST00000373887 USP12O75317 370 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 KHDRBS3O75525 346 aaKnown RBP14.5□□□□□ -0.09
TRAF1-201ENST00000373887 TYMPP19971 482 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 ITGA7Q13683 1181 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 SETMARQ53H47 684 aaPredicted RBP14.5□□□□□ -0.09
TRAF1-201ENST00000373887 FAM126BQ8IXS8 530 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 MYLPFQ96A32 169 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 FAM84AQ96KN4 292 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 CMTM6Q9NX76 183 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 ARHGAP28Q9P2N2 729 aa14.5□□□□□ -0.09
TRAF1-201ENST00000373887 PIK3CDO00329 1044 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 AP3D1O14617 1153 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 MEIS2O14770 477 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 CDC25CP30307 473 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 ATP5C1P36542 298 aaKnown RBP14.49□□□□□ -0.09
TRAF1-201ENST00000373887 CD151P48509 253 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 ABATP80404 500 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 IQCF2Q8IXL9 164 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 PLAGL2Q9UPG8 496 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 YDJCA8MPS7 323 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 RPN2P04844 631 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 MARSP56192 900 aaKnown RBP14.49□□□□□ -0.09
TRAF1-201ENST00000373887 MAD2L1Q13257 205 aaPredicted RBP14.49□□□□□ -0.09
TRAF1-201ENST00000373887 TAB1Q15750 504 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 TRMT5Q32P41 509 aaKnown RBP14.49□□□□□ -0.09
TRAF1-201ENST00000373887 TCEAL5Q5H9L2 206 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 PRMT9Q6P2P2 845 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 FBXO30Q8TB52 745 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 BTBD10Q9BSF8 475 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 EPB41L4BQ9H329 900 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 VTI1BQ9UEU0 232 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 HPSEQ9Y251 543 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 INVSQ9Y283 1065 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 CASZ1Q86V15 1759 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 TCEA3O75764 348 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 ETS1P14921 441 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 FMO4P31512 558 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 POLD2P49005 469 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 PSMD4P55036 377 aaKnown RBP14.49□□□□□ -0.09
TRAF1-201ENST00000373887 PKNOX1P55347 436 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 CYP4F2P78329 520 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 SLC6A3Q01959 620 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 CYP4F3Q08477 520 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 NOL9Q5SY16 702 aaKnown RBP14.49□□□□□ -0.09
TRAF1-201ENST00000373887 ZPBP2Q6X784 338 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 TM6SF2Q9BZW4 377 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 POPDC2Q9HBU9 364 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 NAALADL1Q9UQQ1 740 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 EFR3BQ9Y2G0 817 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.49□□□□□ -0.09
TRAF1-201ENST00000373887 FAM25EA8MYX2 175 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 H3BMM5 538 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 RARGP13631 454 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 PRKAG1P54619 331 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 ADARP55265 1226 aaKnown RBP14.49□□□□□ -0.09
TRAF1-201ENST00000373887 MGAT5Q09328 741 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 PRKAA1Q13131 559 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 SETD9Q8NE22 299 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 CLIP3Q96DZ5 547 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 OXNAD1Q96HP4 312 aaPredicted RBP14.49□□□□□ -0.09
TRAF1-201ENST00000373887 UGT2B28Q9BY64 529 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 RHOBTB2Q9BYZ6 727 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 COMMD9Q9P000 198 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 UBA2Q9UBT2 640 aaPredicted RBP14.49□□□□□ -0.09
TRAF1-201ENST00000373887 CCL16O15467 120 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 TNFAIP8O95379 198 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 BMP10O95393 424 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 BRCC3P46736 316 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 SLC34A1Q06495 639 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 CAPSQ13938 189 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 KCNA10Q16322 511 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms