RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 ZNF787Q6DD87 383 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 CNNM4Q6P4Q7 775 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 Q6ZVU0 165 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 TMPRSS9Q7Z410 1059 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 PTAR1Q7Z6K3 402 aaPredicted RBP8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 HORMAD1Q86X24 394 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 UBA3Q8TBC4 463 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 LMX1AQ8TE12 382 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 CLEC4CQ8WTT0 213 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 RNF139Q8WU17 664 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 JPH3Q8WXH2 748 aaPredicted RBP8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 SEMA4DQ92854 862 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 MIB2Q96AX9 1013 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 ALG14Q96F25 216 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 KLF6Q99612 283 aaPredicted RBP8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 NIF3L1Q9GZT8 377 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 CLPBQ9H078 707 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 SYNDIG1Q9H7V2 258 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 CYP3A43Q9HB55 503 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 ZNF71Q9NQZ8 489 aaPredicted RBP8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 SALL4Q9UJQ4 1053 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 CEP83Q9Y592 693 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 CSNK1G3Q9Y6M4 447 aa8.72□□□□□ -1.01
HMGB1P39-201ENST00000366304 D6RAR5 112 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 XPO1O14980 1071 aaKnown RBP8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 MTSS1O43312 755 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 ATP9BO43861 1147 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 PDGFRAP16234 1089 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 HNRNPA2B1P22626 353 aaKnown RBP8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 COL8A1P27658 744 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 AKT2P31751 481 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 GCLMP48507 274 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 SLC11A2P49281 568 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 IRAK1P51617 712 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 ADKP55263 362 aaKnown RBP8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 TBX4P57082 545 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 DAOAP59103 153 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 CCL7P80098 99 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 SPIDRQ14159 915 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 KNOP1Q1ED39 458 aaKnown RBP8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 GOLGA7BQ2TAP0 167 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 CXorf57Q6NSI4 855 aaKnown RBP8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 BRAPQ7Z569 592 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 LGI2Q8N0V4 545 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 KYQ8NBH2 561 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 TPCN2Q8NHX9 752 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 PMEPA1Q969W9 287 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 AZIN2Q96A70 460 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 SLC39A13Q96H72 371 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 TMX3Q96JJ7 454 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 BLZF1Q9H2G9 400 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 ADNPQ9H2P0 1102 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 TNMDQ9H2S6 317 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 CISHQ9NSE2 258 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 ABCC13Q9NSE7 274 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 DAAM1Q9Y4D1 1078 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 LOXL2Q9Y4K0 774 aa8.71□□□□□ -1.02
HMGB1P39-201ENST00000366304 SCN8AQ9UQD0 1980 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 A6NNZ2 444 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 K7EM74 188 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 K7ERQ8 282 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 MCF2LO15068 1137 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 YY2O15391 372 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 SIAH2O43255 324 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 EIF5BO60841 1220 aaKnown RBP8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 MOCS2O96007 188 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 MT-CO1P00395 513 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 AVPP01185 164 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 CD97P48960 835 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 DLG2Q15700 870 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 RNF219Q5W0B1 726 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 RAP1GAP2Q684P5 730 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 NUGGCQ68CJ6 796 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 BORAQ6PGQ7 559 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 KYAT3Q6YP21 454 aaKnown RBP8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 PARGQ86W56 976 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 SLC9A9Q8IVB4 645 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 SFTPA2Q8IWL1 248 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 CHST14Q8NCH0 376 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 OR8D1Q8WZ84 308 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 USP7Q93009 1102 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 CCDC74AQ96AQ1 378 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 C7orf25Q9BPX7 421 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 ZSWIM1Q9BR11 485 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 LRRC61Q9BV99 259 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 KCTD10Q9H3F6 313 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 TSPAN16Q9UKR8 245 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 PADI4Q9UM07 663 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 OR51B4Q9Y5P0 310 aa8.7□□□□□ -1.02
HMGB1P39-201ENST00000366304 A1L4Q6 167 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 TPP1O14773 563 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 SMAD6O43541 496 aaKnown RBP8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 BNIP3LO60238 219 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 SEMA7AO75326 666 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 PAK4O96013 591 aaPredicted RBP8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 CALCAP01258 141 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 RPLP0P05388 317 aaKnown RBP8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 LCP1P13796 627 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 CCKBRP32239 447 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 TXLNAP40222 546 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms