RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 NckipsdQ9ESJ4 714 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Lama3Q61789 3330 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 P01670 111 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 P01671 111 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 P01672 111 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Krt10P02535 570 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Sbk3P0C5K0 361 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 SrgnP13609 152 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 PolgP54099 1218 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Eif4ebp2P70445 120 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Mc1rQ01727 315 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Sap25Q1EHW4 186 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Parp3Q3ULW8 533 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Foxred2Q3USW5 665 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Otol1Q4ZJM7 482 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 PapolaQ61183 739 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Ric8bQ80XE1 520 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 PimregQ8BFY7 231 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Klhl38Q8BSF5 581 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Acsl5Q8JZR0 683 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Pglyrp2Q8VCS0 530 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Mat2bQ99LB6 334 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Cttnbp2nlQ99LJ0 638 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Rpl9-ps6A0A140T8T4 192 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Gm7942L7N277 499 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 GnazO70443 355 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Hcn2O88703 863 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Rpl9P51410 192 aaKnown RBP16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Rpl10aP53026 217 aaKnown RBP16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Zyg11bQ3UFS0 744 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Smg5Q6ZPY2 1017 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Tmem169Q8BG50 297 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Pacs1Q8K212 961 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 TrabdQ99JY4 376 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Nsmce3Q9CPR8 279 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Klhdc8bQ9D2D9 354 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Stk11Q9WTK7 436 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Tle2Q9WVB2 767 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Col4a6B1AVK5 1691 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 HcrtO55241 130 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 1700061G19RikQ08EE8 705 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Gstt2Q61133 244 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Capn3Q64691 821 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 DgkqQ6P5E8 934 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Tas2r115Q7M719 310 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Msantd1Q8BIL2 278 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Mpp7Q8BVD5 576 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Q8C5S3 137 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Ipo11Q8K2V6 975 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Acad10Q8K370 1069 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Nt5c1bQ91YE9 573 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Gprc5bQ923Z0 410 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 March2Q99M02 246 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Hddc3Q9D114 179 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Numa1E9Q7G0 2094 aaKnown RBP16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Skint6A7XUZ6 1240 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Ctbp1O88712 441 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Cxcr2P35343 359 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Ripply1Q2WG77 201 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Wee2Q66JT0 555 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Deup1Q7M6Y5 601 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Naaladl1Q7M758 745 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Tbc1d17Q8BYH7 645 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 HibchQ8QZS1 385 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Dedd2Q8QZV0 330 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Bag2Q91YN9 210 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Tpd52l2Q9CYZ2 220 aaKnown RBP16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 DcpsQ9DAR7 338 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Scube2Q9JJS0 997 aa16.14■□□□□ 0.17
Trim39-203ENSMUST00000113706 Olfr1049A2ARZ0 308 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Slfn8B1ARD8 910 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 PdgfrbP05622 1098 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Crabp2P22935 138 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 PrkcdP28867 674 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 DesP31001 469 aaKnown RBP16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Vps4bP46467 444 aaKnown RBP16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 StacP97306 403 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Cntn3Q07409 1028 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Rbm22Q8BHS3 420 aaKnown RBP16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 CherpQ8CGZ0 936 aaKnown RBP16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Ces2aQ8QZR3 558 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Tbrg4Q91YM4 630 aaKnown RBP16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Krt7Q9DCV7 457 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Capn10Q9ESK3 666 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Gm6588E9Q3K0 461 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 CrymO54983 313 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Prmt9Q3U3W5 846 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Mfsd3Q5U419 412 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Lcp1Q61233 627 aaKnown RBP16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Tdpoz3Q717B4 365 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Rps6kc1Q8BLK9 1056 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Serbp1Q9CY58 407 aaKnown RBP16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Ubqln5Q9D4I8 510 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Efcab9Q9DAM2 216 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Rsrc1Q9DBU6 334 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 MkksQ9JI70 570 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Prmt1Q9JIF0 371 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 NumbQ9QZS3 653 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Gdf5P43027 495 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Tbc1d10aP58802 500 aa16.13■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms