RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Mthfd2P18155 350 aaKnown RBP18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Il6raP22272 460 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Cdk7Q03147 346 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Adrbk2Q3UYH7 688 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Pdp2Q504M2 532 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Zbtb8osQ505B7 168 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Lag3Q61790 521 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Dlx3Q64205 287 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Gramd1bQ80TI0 738 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Disc1Q811T9 852 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 MiosQ8VE19 875 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Bnip3lQ9Z2F7 218 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Zfp882E9Q4R4 555 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Gm6408J3QNG1 320 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Gm3402K7N5P2 326 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Irs1P35569 1233 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Gabpb1Q00420 383 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Zfp956Q3UZY6 572 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Six4Q61321 775 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Ntan1Q64311 310 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Gja6Q6S5G4 283 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Zbtb8bQ8CII0 484 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Cog4Q8R1U1 785 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Fbxw7Q8VBV4 629 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Sgsm3Q8VCZ6 750 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 DarsQ922B2 501 aaKnown RBP18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 ApipQ9WVQ5 241 aa18.67■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Sbf1Q6ZPE2 1867 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Zfp105G3X9I0 524 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Sema3aO08665 772 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 EgfP01132 1217 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Htr2cP34968 459 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 NxnP97346 435 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Itga4Q00651 1039 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Gpr174Q3U507 335 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Gm5414Q6IFZ8 552 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Lysmd3Q99LE3 305 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Gtf2ird2Q99NI3 936 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 EtfbQ9DCW4 255 aaKnown RBP18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 PtprfA2A8L5 1898 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Gm43951A0A0N4SUT6 962 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 4930469K13RikA0A286YDB2 92 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Zbtb11G5E8B9 1050 aaKnown RBP18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 TpteG5E8H5 664 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Dpep1P31428 410 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Aldh3a1P47739 453 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Fdft1P53798 416 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Hoxb13P70321 286 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Gpr15Q0VDU3 360 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Cyb5r2Q3KNK3 276 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Tmtc3Q8BRH0 920 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Lin52Q8CD94 116 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Prrg2Q8R182 198 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 ClmpQ8R373 373 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Maged2Q9ER67 616 aa18.66■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Ptchd4B9EKX1 904 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 AldoaP05064 364 aaKnown RBP18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 RapsnP12672 412 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Gnao1P18872 354 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Treml2Q2LA85 329 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Pik3r6Q3U6Q4 756 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Il17aQ62386 158 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Zpbp2Q6X786 326 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Atp2c1Q80XR2 918 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Arhgap11aQ80Y19 987 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Sik2Q8CFH6 931 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Zfp617Q91WM0 559 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Pcdha11Q91Y19 950 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Ssxb1Q9CPU1 170 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Med21Q9CQ39 144 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 P2yr13Q9D8I2 337 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Wfdc1Q9ESH5 211 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Cdc42ep5Q9Z0X0 150 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Klhl32A2AJX0 620 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Vmn2r24D3YUI0 854 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Gm10717D3Z1I8 228 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Ccdc144bE9PVZ3 520 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Rnf220Q6PDX6 566 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Rap2cQ8BU31 183 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Snx9Q91VH2 595 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Atp6v1b1Q91YH6 513 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 PigxQ99LV7 254 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Syap1Q9D5V6 365 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Paip2Q9D6V8 124 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Il20Q9JKV9 176 aa18.65■□□□□ 0.58
Ccdc3-201ENSMUST00000027988 Olfr1049A2ARZ0 308 aa18.64■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Olfr220E9Q050 325 aa18.64■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 MttpO08601 894 aa18.64■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Cldn5O54942 218 aa18.64■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Hcn3O88705 779 aa18.64■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Tial1P70318 392 aaKnown RBP18.64■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Mc1rQ01727 315 aa18.64■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Gsdmc2Q2KHK6 480 aa18.64■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Foxred2Q3USW5 665 aa18.64■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Galnt10Q6P9S7 603 aa18.64■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Sel1l3Q80TS8 1137 aa18.64■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Sec24bQ80ZX0 1251 aa18.64■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Mapkap1Q8BKH7 522 aa18.64■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Ano4Q8C5H1 955 aa18.64■□□□□ 0.57
Ccdc3-201ENSMUST00000027988 Gsdmc3Q8CB12 480 aa18.64■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms