RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Rmnd1Q8CI78 450 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 Igsf8Q8R366 611 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 Gemin2Q9CQQ4 269 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 Themis3Q9CU24 569 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 Rfc5Q9D0F6 339 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 Fam3aQ9D8T0 230 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 Slc25a19Q9DAM5 318 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 MrgbpQ9DAT2 204 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 Gm29133A0A1B0GT72 266 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Ccdc144bE9PVZ3 520 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Gm3642K7N6V4 267 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 PrkcdP28867 674 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Mc4rP56450 332 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Ccdc61Q3UJV1 511 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Slc5a10Q5SWY8 596 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Cpa4Q6P8K8 420 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Proser3Q7TSA6 634 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Usp1Q8BJQ2 784 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 AmotQ8VHG2 1126 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Sorcs3Q8VI51 1219 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Rilpl2Q99LE1 197 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Thg1lQ9CY52 298 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 NckipsdQ9ESJ4 714 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Igkv5-45A0A0B4J1J1 115 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Cd151O35566 253 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Dsg3O35902 993 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 UmpsP13439 481 aaKnown RBP20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Vav1P27870 845 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Nudt1P53368 156 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 4930430A15RikQ05AC5 485 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Tfdp2Q64163 446 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Fam107aQ78TU8 144 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Washc5Q8C2E7 1159 aaKnown RBP20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Lin52Q8CD94 116 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Mfsd14bQ8CIA9 507 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Hmgcll1Q8JZS7 343 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Nle1Q8VEJ4 485 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 GcshQ91WK5 170 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Unc45aQ99KD5 944 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Q9D454 513 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Chrac1Q9JKP8 129 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Pdpk1Q9Z2A0 559 aa20.72■□□□□ 0.91
Trim47-201ENSMUST00000021120 Malrd1A2AJX4 2123 aa20.71■□□□□ 0.91
Trim47-201ENSMUST00000021120 Cyp4a12bA2A974 508 aa20.71■□□□□ 0.91
Trim47-201ENSMUST00000021120 Vmn2r84D3YWE3 849 aa20.71■□□□□ 0.91
Trim47-201ENSMUST00000021120 Raph1F2Z3U3 1266 aa20.71■□□□□ 0.91
Trim47-201ENSMUST00000021120 Pias1O88907 651 aa20.71■□□□□ 0.91
Trim47-201ENSMUST00000021120 PrnpP04925 254 aa20.71■□□□□ 0.91
Trim47-201ENSMUST00000021120 KitP05532 979 aa20.71■□□□□ 0.91
Trim47-201ENSMUST00000021120 FynP39688 537 aa20.71■□□□□ 0.91
Trim47-201ENSMUST00000021120 Flt3lgP49772 232 aa20.71■□□□□ 0.91
Trim47-201ENSMUST00000021120 Scaf4Q6PFF0 1209 aaKnown RBP20.71■□□□□ 0.91
Trim47-201ENSMUST00000021120 Q80Y73 168 aa20.71■□□□□ 0.91
Trim47-201ENSMUST00000021120 Ctxn3Q8BXZ0 80 aa20.71■□□□□ 0.91
Trim47-201ENSMUST00000021120 Taf5Q8C092 801 aa20.71■□□□□ 0.91
Trim47-201ENSMUST00000021120 Rfx6Q8C7R7 927 aa20.71■□□□□ 0.91
Trim47-201ENSMUST00000021120 Ppa2Q91VM9 330 aa20.71■□□□□ 0.91
Trim47-201ENSMUST00000021120 Cyp4a12aQ91WL5 508 aa20.71■□□□□ 0.91
Trim47-201ENSMUST00000021120 Sntg2Q925E0 539 aa20.71■□□□□ 0.91
Trim47-201ENSMUST00000021120 Def8Q99J78 448 aa20.71■□□□□ 0.91
Trim47-201ENSMUST00000021120 TrabdQ99JY4 376 aa20.71■□□□□ 0.91
Trim47-201ENSMUST00000021120 Slc39a3Q99K24 317 aa20.71■□□□□ 0.91
Trim47-201ENSMUST00000021120 Efhc1Q9D9T8 648 aa20.71■□□□□ 0.91
Trim47-201ENSMUST00000021120 Strn3Q9ERG2 796 aa20.71■□□□□ 0.91
Trim47-201ENSMUST00000021120 Skint6A7XUZ6 1240 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Gm8113E0CXS8 587 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Dcpp3L7N259 170 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Vmn2r39L7N2E5 861 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Tnk2O54967 1055 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Gp6P0C191 313 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Pex2P55098 305 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Arid5aQ3U108 590 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Tmem237Q3V0J1 427 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Ankrd6Q69ZU8 712 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 2700097O09RikQ6PGK3 301 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Clec2eQ80XD9 204 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Enpp4Q8BTJ4 456 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Stau2Q8CJ67 570 aaKnown RBP20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Nudcd3Q8R1N4 363 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 PompQ9CQT5 141 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Akr1a1Q9JII6 325 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Plscr1Q9JJ00 328 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Akap8lQ9R0L7 642 aaKnown RBP20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Bmp15Q9Z0L4 392 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Plxna4Q80UG2 1893 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Pcdh7A0A0A6YY83 1255 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Spata31E9QAF0 1014 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Soat2O88908 525 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Yme1l1O88967 715 aaKnown RBP20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Kcnj6P48542 425 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Gm29609Q3UU56 907 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 PkdccQ5RJI4 492 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Sema3cQ62181 751 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Il17aQ62386 158 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Trim62Q80V85 475 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Lrrc27Q80YS5 523 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Gtf3c2Q8BL74 907 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Pdcd2lQ8C5N5 364 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 PlvapQ91VC4 438 aa20.7■□□□□ 0.9
Trim47-201ENSMUST00000021120 Haus8Q99L00 373 aa20.7■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms