RNA–Protein interactions for RNA: ENST00000641625.1

CASC19-246, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,606 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-246ENST00000641625 RSPH9Q9H1X1 276 aaPredicted RBP6.54□□□□□ -1.36
CASC19-246ENST00000641625 MRPL47Q9HD33 250 aaKnown RBP6.54□□□□□ -1.36
CASC19-246ENST00000641625 ITM2CQ9NQX7 267 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 NDFIP2Q9NV92 336 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 WSB2Q9NYS7 404 aaPredicted RBP6.54□□□□□ -1.36
CASC19-246ENST00000641625 VPS51Q9UID3 782 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 FZD10Q9ULW2 581 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 HS3ST2Q9Y278 367 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.54□□□□□ -1.36
CASC19-246ENST00000641625 ATXN2Q99700 1313 aaKnown RBP6.54□□□□□ -1.36
CASC19-246ENST00000641625 CBX4O00257 560 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 CREB3O43889 395 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 PRPSAP2O60256 369 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 FOXD2O60548 495 aaPredicted RBP6.54□□□□□ -1.36
CASC19-246ENST00000641625 RNASEH1O60930 286 aaKnown RBP6.54□□□□□ -1.36
CASC19-246ENST00000641625 MFAP3LO75121 409 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 LRCH4O75427 683 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 RNF8O76064 485 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 MT-CO1P00395 513 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 DNTTP04053 509 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 GLDCP23378 1020 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 ITPKAP23677 461 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 EPHB2P29323 1055 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 OXTRP30559 389 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 EIF4A3P38919 411 aaKnown RBP6.54□□□□□ -1.36
CASC19-246ENST00000641625 GCGRP47871 477 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 MAPKAPK2P49137 400 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 ADKP55263 362 aaKnown RBP6.54□□□□□ -1.36
CASC19-246ENST00000641625 GNA12Q03113 381 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 GFPT1Q06210 699 aaPredicted RBP6.54□□□□□ -1.36
CASC19-246ENST00000641625 ZNF33AQ06730 810 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 SEMA3BQ13214 749 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 DLG2Q15700 870 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 CST6Q15828 149 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 ACCSLQ4AC99 568 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 CCDC122Q5T0U0 273 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 LINGO4Q6UY18 593 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 Q6ZVU0 165 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 SYT12Q8IV01 421 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 MMAAQ8IVH4 418 aaKnown RBP6.54□□□□□ -1.36
CASC19-246ENST00000641625 SLC41A1Q8IVJ1 513 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 STK40Q8N2I9 435 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 SH2D3CQ8N5H7 860 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 C12orf50Q8NA57 414 aaPredicted RBP6.54□□□□□ -1.36
CASC19-246ENST00000641625 ATP11CQ8NB49 1132 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 PIGKQ92643 395 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 FOXJ1Q92949 421 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 RMDN1Q96DB5 314 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 PEBP4Q96S96 227 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 FAM129BQ96TA1 746 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 SPON2Q9BUD6 331 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 GPR174Q9BXC1 333 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 RETREG1Q9H6L5 497 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 ATP13A1Q9HD20 1204 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 VPS45Q9NRW7 570 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 RXFP3Q9NSD7 469 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 ABHD10Q9NUJ1 306 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 TMEM74BQ9NUR3 256 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 TMEM248Q9NWD8 314 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 ZNHIT6Q9NWK9 470 aaKnown RBP6.54□□□□□ -1.36
CASC19-246ENST00000641625 GPATCH2LQ9NWQ4 482 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 PCSK1NQ9UHG2 260 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 DNAI1Q9UI46 699 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 NENFQ9UMX5 172 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 LHX6Q9UPM6 363 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 AP4E1Q9UPM8 1137 aa6.54□□□□□ -1.36
CASC19-246ENST00000641625 NUMA1Q14980 2115 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.53□□□□□ -1.36
CASC19-246ENST00000641625 SSU72P8A0A1W2PR75 194 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 PRR5-ARHGAP8B1AHC4 643 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 PATE3B3GLJ2 98 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 K7ERQ8 282 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 MID1O15344 667 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 SMAD6O43541 496 aaKnown RBP6.53□□□□□ -1.36
CASC19-246ENST00000641625 BNIP3LO60238 219 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 GDF9O60383 454 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 RAMP2O60895 175 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 ZMPSTE24O75844 475 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 IL1BP01584 269 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 CYP1A2P05177 515 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 FBXO45P0C2W1 286 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 SRCP12931 536 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 MIPP30301 263 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 ACSL1P33121 698 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 HOXD12P35452 270 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 PCK1P35558 622 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 ACVRL1P37023 503 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 ETFBP38117 255 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 PSMD8P48556 350 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 GALCP54803 685 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 TPI1P60174 286 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 ARHGAP8P85298 464 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 POLD3Q15054 466 aaPredicted RBP6.53□□□□□ -1.36
CASC19-246ENST00000641625 SLC18A3Q16572 532 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 CA9Q16790 459 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 ASTE1Q2TB18 679 aaPredicted RBP6.53□□□□□ -1.36
CASC19-246ENST00000641625 AASDHQ4L235 1098 aaPredicted RBP6.53□□□□□ -1.36
CASC19-246ENST00000641625 DAB2IPQ5VWQ8 1189 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 IL31Q6EBC2 164 aa6.53□□□□□ -1.36
CASC19-246ENST00000641625 RETSATQ6NUM9 610 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms