RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 SLC25A11Q02978 314 aaKnown RBP10.86□□□□□ -0.67
PTCH1-225ENST00000551845 SFSWAPQ12872 951 aaKnown RBP10.86□□□□□ -0.67
PTCH1-225ENST00000551845 PDK2Q15119 407 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 ATP13A4Q4VNC1 1196 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 ODF2Q5BJF6 829 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 C9orf64Q5T6V5 341 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 TXNRD3NBQ6F5E7 133 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 LAIR1Q6GTX8 287 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 CYP4V2Q6ZWL3 525 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-225ENST00000551845 POLNQ7Z5Q5 900 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 KIAA1328Q86T90 577 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 SH2D3CQ8N5H7 860 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 PTPRN2Q92932 1015 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 SPACA7Q96KW9 195 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 PSMB7Q99436 277 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 MKRN2Q9H000 416 aaKnown RBP10.86□□□□□ -0.67
PTCH1-225ENST00000551845 CD248Q9HCU0 757 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 ITM2CQ9NQX7 267 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.86□□□□□ -0.67
PTCH1-225ENST00000551845 VPS51Q9UID3 782 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 HS3ST2Q9Y278 367 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 INVSQ9Y283 1065 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 MYOFQ9NZM1 2061 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 SPTBN2O15020 2390 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 ZSCAN5CA6NGD5 496 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-225ENST00000551845 ARHGAP42A6NI28 874 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 RASA4BC9J798 803 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 RASA4O43374 803 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 BUB1O43683 1085 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 SPOPO43791 374 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 SIN3BO75182 1162 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 ZMPSTE24O75844 475 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 RHOBTB1O94844 696 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 MT-CO1P00395 513 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 DNTTP04053 509 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 RETP07949 1114 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 SRCP12931 536 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 NDUFV2P19404 249 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 AMPD1P23109 780 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 OXTRP30559 389 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 RECQLP46063 649 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-225ENST00000551845 STK19P49842 368 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-225ENST00000551845 VAV2P52735 878 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 COPAP53621 1224 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 TAS2R40P59535 323 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 ZBTB16Q05516 673 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 KIF5AQ12840 1032 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 SRSF5Q13243 272 aaKnown RBP10.85□□□□□ -0.67
PTCH1-225ENST00000551845 PARP15Q460N3 678 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 LRRC38Q5VT99 294 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 KIAA1324Q6UXG2 1013 aaKnown RBP10.85□□□□□ -0.67
PTCH1-225ENST00000551845 LINGO4Q6UY18 593 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 PRR23CQ6ZRP0 262 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 TMEM139Q8IV31 216 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 LRRC8AQ8IWT6 810 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 RHOT1Q8IXI2 618 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 CCDC112Q8NEF3 446 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 RLN3Q8WXF3 142 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 CCDC114Q96M63 670 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 MAK16Q9BXY0 300 aaKnown RBP10.85□□□□□ -0.67
PTCH1-225ENST00000551845 SLC39A8Q9C0K1 460 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 MTG2Q9H4K7 406 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 PCDH18Q9HCL0 1135 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 SEMA4GQ9NTN9 838 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 RCOR3Q9P2K3 495 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-225ENST00000551845 SCML1Q9UN30 329 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 NEU3Q9UQ49 428 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 NCKAP1Q9Y2A7 1128 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 ALG6Q9Y672 507 aa10.85□□□□□ -0.67
PTCH1-225ENST00000551845 BTNL10A8MVZ5 291 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 K7ERQ8 282 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 MCF2LO15068 1137 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 DCLK1O15075 740 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 PJA2O43164 708 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 ARHGAP6O43182 974 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 BNIP3LO60238 219 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 LRP3O75074 770 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 COMTP21964 271 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 GLDCP23378 1020 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 KDELR1P24390 212 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 IL4RP24394 825 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 GJC1P36383 396 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 P2RY2P41231 377 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 DNA2P51530 1060 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 RPS14P62263 151 aaKnown RBP10.84□□□□□ -0.67
PTCH1-225ENST00000551845 ARF5P84085 180 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 ELAVL3Q14576 367 aaKnown RBP10.84□□□□□ -0.67
PTCH1-225ENST00000551845 ELF2Q15723 593 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 IFI16Q16666 785 aaKnown RBP10.84□□□□□ -0.67
PTCH1-225ENST00000551845 MAP7D1Q3KQU3 841 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 INO80DQ53TQ3 878 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-225ENST00000551845 FAM46CQ5VWP2 391 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 ZNF776Q68DI1 518 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-225ENST00000551845 TMCO3Q6UWJ1 677 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 SLC36A4Q6YBV0 504 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 DSG4Q86SJ6 1040 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 STK40Q8N2I9 435 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 ACRBPQ8NEB7 543 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 FAM71BQ8TC56 605 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 FRS2Q8WU20 508 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms