RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 PLXNA3P51805 1871 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 M0QYV0 167 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 O00370 1275 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 BEST1O76090 585 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 RTN3O95197 1032 aaPredicted RBP5.32□□□□□ -1.56
CLIP1-217ENST00000543205 TBX18O95935 607 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 EPHX1P07099 455 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 TPM1P09493 284 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 PDE6CP51160 858 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 KCNQ1P51787 676 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 CACNA2D1P54289 1103 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 JAM2P57087 298 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 NTHL1P78549 312 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 BST2Q10589 180 aaKnown RBP5.32□□□□□ -1.56
CLIP1-217ENST00000543205 SF1Q15637 639 aaKnown RBP5.32□□□□□ -1.56
CLIP1-217ENST00000543205 SMAD2Q15796 467 aaKnown RBP5.32□□□□□ -1.56
CLIP1-217ENST00000543205 ANO4Q32M45 955 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 CCDC38Q502W7 563 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 PPM1JQ5JR12 505 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 ITPRIPL1Q6GPH6 555 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 HIBCHQ6NVY1 386 aaPredicted RBP5.32□□□□□ -1.56
CLIP1-217ENST00000543205 SARM1Q6SZW1 724 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 CLEC20AQ6ZU45 233 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 NLRC3Q7RTR2 1065 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 SLC47A2Q86VL8 602 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 NUP93Q8N1F7 819 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 LRRN4CLQ8ND94 238 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 STKLD1Q8NE28 680 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 ZNF397Q8NF99 534 aaPredicted RBP5.32□□□□□ -1.56
CLIP1-217ENST00000543205 UBA3Q8TBC4 463 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 FEZF2Q8TBJ5 459 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 ZNF606Q8WXB4 792 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 FAM46AQ96IP4 442 aaKnown RBP5.32□□□□□ -1.56
CLIP1-217ENST00000543205 EDEM3Q9BZQ6 932 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 UBXN6Q9BZV1 441 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 FBXO44Q9H4M3 255 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 POMKQ9H5K3 350 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 CSNK1G1Q9HCP0 422 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 ACP6Q9NPH0 428 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 COMMD8Q9NX08 183 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 CDH22Q9UJ99 828 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 MYO6Q9UM54 1294 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 HIF3AQ9Y2N7 669 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 TRAF6Q9Y4K3 522 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 CLUHO75153 1309 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 TRANK1O15050 2925 aa5.32□□□□□ -1.56
CLIP1-217ENST00000543205 A0A1W2PQJ5 194 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 FAM170AA1A519 330 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 LRRC53A6NM62 1247 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 XPO1O14980 1071 aaKnown RBP5.31□□□□□ -1.56
CLIP1-217ENST00000543205 IL9P15248 144 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 CYP11B1P15538 503 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 FERP16591 822 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 RAB6AP20340 208 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 TNFSF4P23510 183 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 YWHAQP27348 245 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 GABRR2P28476 465 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 CDC25CP30307 473 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 PBX1P40424 430 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 SLC5A3P53794 718 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 GABREP78334 506 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 LRRC32Q14392 662 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 ARHGAP15Q53QZ3 475 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 FIGNQ5HY92 759 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 SFMBT2Q5VUG0 894 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 SPECC1LQ69YQ0 1117 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 DENND1BQ6P3S1 775 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 PIGZQ86VD9 579 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 TMTC1Q8IUR5 882 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 VSTM4Q8IW00 320 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 OTUD6BQ8N6M0 293 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 ZMIZ2Q8NF64 920 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 ADAMTS18Q8TE60 1221 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 ING5Q8WYH8 240 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 FBXO32Q969P5 355 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 ACSF2Q96CM8 615 aaPredicted RBP5.31□□□□□ -1.56
CLIP1-217ENST00000543205 SLITRK1Q96PX8 696 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 ZSWIM1Q9BR11 485 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 TTLL2Q9BWV7 592 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 PHF7Q9BWX1 381 aaPredicted RBP5.31□□□□□ -1.56
CLIP1-217ENST00000543205 LRRC4Q9HBW1 653 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 ZNF334Q9HCZ1 680 aaPredicted RBP5.31□□□□□ -1.56
CLIP1-217ENST00000543205 PNPLA8Q9NP80 782 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 TMEM30AQ9NV96 361 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 THG1LQ9NWX6 298 aaKnown RBP5.31□□□□□ -1.56
CLIP1-217ENST00000543205 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.31□□□□□ -1.56
CLIP1-217ENST00000543205 SAMD15Q9P1V8 674 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 NR2E1Q9Y466 385 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 CEP83Q9Y592 693 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 SLC22A31A6NKX4 558 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 TRIM64CA6NLI5 447 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 HHLA1C9JL84 531 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 KPNA5O15131 536 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 RNGTTO60942 597 aaKnown RBP5.31□□□□□ -1.56
CLIP1-217ENST00000543205 SLITRK5O94991 958 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 CRTAMO95727 393 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 HRGP04196 525 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 POLBP06746 335 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 LCP1P13796 627 aa5.31□□□□□ -1.56
CLIP1-217ENST00000543205 HMGA1P17096 107 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms