RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 PLXNA2O75051 1894 aa11.14□□□□□ -0.63
PVT1-208ENST00000519481 PTPRBP23467 1997 aa11.14□□□□□ -0.63
PVT1-208ENST00000519481 URB1O60287 2271 aaKnown RBP11.14□□□□□ -0.63
PVT1-208ENST00000519481 ZFHX4Q86UP3 3567 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 DRGXA6NNA5 263 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 GOLGA8SH3BPF8 625 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 SNAP91O60641 907 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 CNTN5O94779 1100 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 AKT2P31751 481 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 CDH5P33151 784 aaPredicted RBP11.13□□□□□ -0.63
PVT1-208ENST00000519481 GABRB2P47870 512 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 METAP1P53582 386 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 SLC20A2Q08357 652 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 BNIP3Q12983 259 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 DNAJC3Q13217 504 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 ILKQ13418 452 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 SHBQ15464 509 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 COL28A1Q2UY09 1125 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 ALFQ53S48 1182 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 HSP90AA4PQ58FG1 418 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 KLHDC7AQ5VTJ3 777 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 TAF3Q5VWG9 929 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 RETSATQ6NUM9 610 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 ZNF783Q6ZMS7 281 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 TFAP2DQ7Z6R9 452 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 XYLT1Q86Y38 959 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 TMIEQ8NEW7 156 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 NT5C3BQ969T7 300 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 NXPE2Q96DL1 559 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 HAPLN3Q96S86 360 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 SPON2Q9BUD6 331 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 NUP62CLQ9H1M0 184 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 SCUBE2Q9NQ36 999 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 FHOD1Q9Y613 1164 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 ASPMQ8IZT6 3477 aa11.13□□□□□ -0.63
PVT1-208ENST00000519481 A0A1W2PQU0 124 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 ILVBLA1L0T0 632 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 CBX4O00257 560 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 SLC31A1O15431 190 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 SRGAP2O75044 1071 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 PCDH8O95206 1070 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 MT-CO1P00395 513 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 UCHL3P15374 230 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 CKMT2P17540 419 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 HNRNPA2B1P22626 353 aaKnown RBP11.12□□□□□ -0.63
PVT1-208ENST00000519481 RRM1P23921 792 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 ACADVLP49748 655 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 CAMK2BQ13554 666 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 DPCR1Q3MIW9 517 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 ARL13BQ3SXY8 428 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 CT47A1Q5JQC4 288 aaPredicted RBP11.12□□□□□ -0.63
PVT1-208ENST00000519481 MIIPQ5JXC2 388 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 OTUD1Q5VV17 481 aaPredicted RBP11.12□□□□□ -0.63
PVT1-208ENST00000519481 C22orf39Q6P5X5 142 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 ERN2Q76MJ5 926 aaKnown RBP11.12□□□□□ -0.63
PVT1-208ENST00000519481 HORMAD1Q86X24 394 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 ZNF677Q86XU0 584 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 SPATS2Q86XZ4 545 aaKnown RBP11.12□□□□□ -0.63
PVT1-208ENST00000519481 MARCH9Q86YJ5 346 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 OR2A12Q8NGT7 310 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 FAM174AQ8TBP5 190 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 HNRNPLLQ8WVV9 542 aaKnown RBP11.12□□□□□ -0.63
PVT1-208ENST00000519481 PSMB7Q99436 277 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 STK33Q9BYT3 514 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 ZYG11BQ9C0D3 744 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 MPP6Q9NZW5 540 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 IL36AQ9UHA7 158 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 SNX10Q9Y5X0 201 aa11.12□□□□□ -0.63
PVT1-208ENST00000519481 COL5A1P20908 1838 aaPredicted RBP11.12□□□□□ -0.63
PVT1-208ENST00000519481 SPEGQ15772 3267 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 FREM2Q5SZK8 3169 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 NYNRINQ9P2P1 1898 aaKnown RBP11.11□□□□□ -0.63
PVT1-208ENST00000519481 IGLV3-10A0A075B6K4 115 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 A0A0D9SEW6 157 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 K7ERQ8 282 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 THEGLP0DJG4 465 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 ALPPL2P10696 532 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 PRLRP16471 622 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 TFE3P19532 575 aaPredicted RBP11.11□□□□□ -0.63
PVT1-208ENST00000519481 EEF1GP26641 437 aaKnown RBP11.11□□□□□ -0.63
PVT1-208ENST00000519481 ETFBP38117 255 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 DNA2P51530 1060 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 NEK3P51956 506 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 DAB2P98082 770 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 E2F1Q01094 437 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 KCNMA1Q12791 1236 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 ARSIQ5FYB1 569 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 PIP5KL1Q5T9C9 394 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 HES3Q5TGS1 186 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 SFMBT2Q5VUG0 894 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 NAA35Q5VZE5 725 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 LINGO4Q6UY18 593 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 ARCQ7LC44 396 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 PDZD3Q86UT5 571 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 FAM131BQ86XD5 332 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 ZNF683Q8IZ20 524 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 PCDH20Q8N6Y1 951 aaKnown RBP11.11□□□□□ -0.63
PVT1-208ENST00000519481 OR7D4Q8NG98 312 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 GRIN3AQ8TCU5 1115 aa11.11□□□□□ -0.63
PVT1-208ENST00000519481 CPA5Q8WXQ8 436 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms