RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 TMIEQ8NEW7 156 aa11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 TFAP2BQ92481 460 aa11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 PRR11Q96HE9 360 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 ARHGAP9Q9BRR9 750 aa11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 FZD3Q9NPG1 666 aa11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 GPR27Q9NS67 375 aa11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.76□□□□□ -0.536e-7■■■■■ 33.9
TRAPPC9-203ENST00000517667 XPO7Q9UIA9 1087 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 SALL4Q9UJQ4 1053 aa11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 HS3ST3A1Q9Y663 406 aa11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 CCDC187A0A096LP49 1063 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 SPTY2D1-AS1A0A0U1RR47 76 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 A0A1W2PNU3 283 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 CPED1A4D0V7 1026 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 EME2A4GXA9 379 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 K7ELQ4 463 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 KPNA3O00505 521 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 SLC16A3O15427 465 aaKnown RBP11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 BNIP3LO60238 219 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 NEBLO76041 1014 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 PCDH8O95206 1070 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 TRUB2O95900 331 aaKnown RBP11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 CSF2P04141 144 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 PRNPP04156 253 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 SFTPCP11686 197 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 CMA1P23946 247 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 ACADSBP45954 432 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 RPL34P49207 117 aaKnown RBP11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 RPIAP49247 311 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 NUMBP49757 651 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 NR0B2Q15466 257 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 FOXD4L6Q3SYB3 417 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 GUSBP11Q6P575 273 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 FOXR1Q6PIV2 292 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 FOXD4L3Q6VB84 417 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 KYAT3Q6YP21 454 aaKnown RBP11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 Q6ZSR6 202 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 EFL1Q7Z2Z2 1120 aaKnown RBP11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 ZSCAN30Q86W11 494 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 KLK6Q92876 244 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 GLMNQ92990 594 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 NAT6Q93015 286 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 PPP1R16AQ96I34 528 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 PRMT1Q99873 361 aaKnown RBP11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 FEM1AQ9BSK4 669 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 TRIM4Q9C037 500 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 POPDC2Q9HBU9 364 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 ST7Q9NRC1 585 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 STARD5Q9NSY2 213 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 VPS28Q9UK41 221 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 HS3ST2Q9Y278 367 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 PCDHB4Q9Y5E5 795 aa11.75□□□□□ -0.53
TRAPPC9-203ENST00000517667 TRPM6Q9BX84 2022 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 A0A1B0GVL5 298 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 TPP1O14773 563 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 AQP9O43315 295 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 TNFSF15O95150 251 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 GJB6O95452 261 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 F13A1P00488 732 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 IGLV3-25P01717 112 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 PRR29P0C7W0 189 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 ZSCAN22P10073 491 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 BRD2P25440 801 aaKnown RBP11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 CCR1P32246 355 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 CHRNA3P32297 505 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 RABIFP47224 123 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 CLDN2P57739 230 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 KRT83P78385 493 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 DPYDQ12882 1025 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 LRMPQ12912 555 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 EIF3IQ13347 325 aaKnown RBP11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 FZD2Q14332 565 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 TMEM259Q4ZIN3 620 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 ZNF542PQ5EBM4 170 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 SYPL2Q5VXT5 272 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 KIAA1161Q6NSJ0 714 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 ZNF574Q6ZN55 896 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 USP53Q70EK8 1073 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 ERN2Q76MJ5 926 aaKnown RBP11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 CIR1Q86X95 450 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 EXD3Q8N9H8 876 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 BTN2A2Q8WVV5 523 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 ARRDC3Q96B67 414 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 ALG14Q96F25 216 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 LIN37Q96GY3 246 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 RPRD1AQ96P16 312 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 NOX5Q96PH1 765 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 IL12RB2Q99665 862 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 HDAC8Q9BY41 377 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 RCOR1Q9UKL0 485 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 HPSEQ9Y251 543 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 PCDHGA7Q9Y5G6 932 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 KIF26BQ2KJY2 2108 aa11.74□□□□□ -0.53
TRAPPC9-203ENST00000517667 CLDN11O75508 207 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 CTSLP07711 333 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 SRCP12931 536 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 KRT10P13645 584 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 SYKP43405 635 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 YWHAZP63104 245 aaKnown RBP11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 RPS21P63220 83 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms