RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 PDP2Q9P2J9 529 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 GJD2Q9UKL4 321 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 TNFSF13BQ9Y275 285 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 GPR52Q9Y2T5 361 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 PCDHGB3Q9Y5G1 929 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 WDR97A6NE52 1622 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 RIMBP3CA6NJZ7 1639 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 RIMBP3BA6NNM3 1639 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 RIMBP3Q9UFD9 1639 aa3.55□□□□□ -1.84
HERC4-215ENST00000515753 CKAP5Q14008 2032 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 SYNJ2O15056 1496 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 ARAP1Q96P48 1450 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 A0A1B0GVC2 190 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 H0Y3Z8 333 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 TIMM44O43615 452 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 SLC28A2O43868 658 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 KLKB1P03952 638 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 CYP21A2P08686 494 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 TGFB3P10600 412 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 PRPH2P23942 346 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 MAPK9P45984 424 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 OAZ1P54368 228 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 MANEAQ5SRI9 462 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 INTS11Q5TA45 600 aaKnown RBP3.54□□□□□ -1.84
HERC4-215ENST00000515753 GGT6Q6P531 493 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 CYB5R4Q7L1T6 521 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 RASGRP2Q7LDG7 609 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 KLBQ86Z14 1044 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 MYCT1Q8N699 235 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 OR6Y1Q8NGX8 325 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 B4GALNT2Q8NHY0 566 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 CENPIQ92674 756 aaPredicted RBP3.54□□□□□ -1.84
HERC4-215ENST00000515753 KAT2AQ92830 837 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 EME1Q96AY2 570 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 ZNF479Q96JC4 524 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 FRG2BQ96QU4 278 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 FRMD8Q9BZ67 464 aaPredicted RBP3.54□□□□□ -1.84
HERC4-215ENST00000515753 MRPL44Q9H9J2 332 aaKnown RBP3.54□□□□□ -1.84
HERC4-215ENST00000515753 PDE11AQ9HCR9 933 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 SAYSD1Q9NPB0 183 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 RASSF1Q9NS23 344 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 GRHPRQ9UBQ7 328 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.54□□□□□ -1.84
HERC4-215ENST00000515753 SRP68Q9UHB9 627 aaKnown RBP3.54□□□□□ -1.84
HERC4-215ENST00000515753 UTS2RQ9UKP6 389 aa3.54□□□□□ -1.84
HERC4-215ENST00000515753 TMEM247A6NEH6 219 aa3.53□□□□□ -1.84
HERC4-215ENST00000515753 AGAP5A6NIR3 686 aa3.53□□□□□ -1.84
HERC4-215ENST00000515753 J3KRW8 73 aa3.53□□□□□ -1.84
HERC4-215ENST00000515753 GRM8O00222 908 aa3.53□□□□□ -1.84
HERC4-215ENST00000515753 NCAM2O15394 837 aa3.53□□□□□ -1.84
HERC4-215ENST00000515753 MSI1O43347 362 aaKnown RBP3.53□□□□□ -1.84
HERC4-215ENST00000515753 NDUFB8O95169 186 aa3.53□□□□□ -1.84
HERC4-215ENST00000515753 HOXB9P17482 250 aaPredicted RBP3.53□□□□□ -1.84
HERC4-215ENST00000515753 POLD2P49005 469 aa3.53□□□□□ -1.84
HERC4-215ENST00000515753 RASSF2P50749 326 aa3.53□□□□□ -1.84
HERC4-215ENST00000515753 EIF5P55010 431 aaKnown RBP3.53□□□□□ -1.84
HERC4-215ENST00000515753 RNASELQ05823 741 aaKnown RBP3.53□□□□□ -1.84
HERC4-215ENST00000515753 GALNT3Q14435 633 aa3.53□□□□□ -1.84
HERC4-215ENST00000515753 KCTD2Q14681 263 aa3.53□□□□□ -1.84
HERC4-215ENST00000515753 PRTGQ2VWP7 1150 aa3.53□□□□□ -1.84
HERC4-215ENST00000515753 PLK5Q496M5 336 aa3.53□□□□□ -1.84
HERC4-215ENST00000515753 ZNF280DQ6N043 979 aa3.53□□□□□ -1.84
HERC4-215ENST00000515753 CYP26C1Q6V0L0 522 aa3.53□□□□□ -1.84
HERC4-215ENST00000515753 ANKS1BQ7Z6G8 1248 aa3.53□□□□□ -1.84
HERC4-215ENST00000515753 CCDC117Q8IWD4 279 aaPredicted RBP3.53□□□□□ -1.84
HERC4-215ENST00000515753 ADHFE1Q8IWW8 467 aa3.53□□□□□ -1.84
HERC4-215ENST00000515753 BICD2Q8TD16 824 aa3.53□□□□□ -1.84
HERC4-215ENST00000515753 ADAD1Q96M93 576 aaKnown RBP3.53□□□□□ -1.84
HERC4-215ENST00000515753 UNC45AQ9H3U1 944 aa3.53□□□□□ -1.84
HERC4-215ENST00000515753 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.53□□□□□ -1.84
HERC4-215ENST00000515753 NRBP1Q9UHY1 535 aa3.53□□□□□ -1.84
HERC4-215ENST00000515753 COG5Q9UP83 839 aa3.53□□□□□ -1.84
HERC4-215ENST00000515753 PCDHA10Q9Y5I2 948 aa3.53□□□□□ -1.84
HERC4-215ENST00000515753 SYNJ1O43426 1573 aa3.53□□□□□ -1.84
HERC4-215ENST00000515753 GAPVD1Q14C86 1478 aa3.53□□□□□ -1.84
HERC4-215ENST00000515753 SNAPC4Q5SXM2 1469 aa3.53□□□□□ -1.84
HERC4-215ENST00000515753 WRNQ14191 1432 aaPredicted RBP eCLIP3.53□□□□□ -1.85
HERC4-215ENST00000515753 TRBV5-7A0A0A0MS05 114 aa3.52□□□□□ -1.85
HERC4-215ENST00000515753 TMEM272A0A1B0GTI8 110 aa3.52□□□□□ -1.85
HERC4-215ENST00000515753 CXorf65A6NEN9 183 aa3.52□□□□□ -1.85
HERC4-215ENST00000515753 NPIPB13A6NJU9 1138 aa3.52□□□□□ -1.85
HERC4-215ENST00000515753 A6NNC1 897 aa3.52□□□□□ -1.85
HERC4-215ENST00000515753 NPIPB5A8MRT5 1133 aa3.52□□□□□ -1.85
HERC4-215ENST00000515753 NPIPB4C9JG80 1138 aa3.52□□□□□ -1.85
HERC4-215ENST00000515753 IPO5O00410 1097 aaKnown RBP3.52□□□□□ -1.85
HERC4-215ENST00000515753 ZC3H11AO75152 810 aaKnown RBP eCLIP3.52□□□□□ -1.85
HERC4-215ENST00000515753 RNASEH2AO75792 299 aaKnown RBP3.52□□□□□ -1.85
HERC4-215ENST00000515753 NFATC1O95644 943 aa3.52□□□□□ -1.85
HERC4-215ENST00000515753 AGR2O95994 175 aa3.52□□□□□ -1.85
HERC4-215ENST00000515753 HLA-DQA2P01906 255 aa3.52□□□□□ -1.85
HERC4-215ENST00000515753 NGFRP08138 427 aa3.52□□□□□ -1.85
HERC4-215ENST00000515753 PKMP14618 531 aaKnown RBP3.52□□□□□ -1.85
HERC4-215ENST00000515753 HOXB2P14652 356 aa3.52□□□□□ -1.85
HERC4-215ENST00000515753 CHRNA5P30532 468 aa3.52□□□□□ -1.85
HERC4-215ENST00000515753 PGGT1BP53609 377 aa3.52□□□□□ -1.85
HERC4-215ENST00000515753 ZXDBP98169 803 aa3.52□□□□□ -1.85
HERC4-215ENST00000515753 ZBTB16Q05516 673 aa3.52□□□□□ -1.85
HERC4-215ENST00000515753 CDK18Q07002 472 aa3.52□□□□□ -1.85
HERC4-215ENST00000515753 EFR3AQ14156 821 aa3.52□□□□□ -1.85
HERC4-215ENST00000515753 RPS6KA2Q15349 733 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms