RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 DPPA5A6NC42 116 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 E9PBE3 544 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 M0QZ92 97 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 MAP3K7O43318 606 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 DCXO43602 365 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 KIF1CO43896 1103 aaKnown RBP10.03□□□□□ -0.8
CLIP1-204ENST00000501271 KLHL41O60662 606 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 MT-CYBP00156 380 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-204ENST00000501271 CHRNGP07510 517 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 LINGO3P0C6S8 592 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 SRGAP2BP0DMP2 458 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 MYL4P12829 197 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 MRPS35P82673 323 aaKnown RBP10.03□□□□□ -0.8
CLIP1-204ENST00000501271 RWDD4Q6NW29 188 aaKnown RBP10.03□□□□□ -0.8
CLIP1-204ENST00000501271 DCLRE1AQ6PJP8 1040 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 FRMD7Q6ZUT3 714 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 PPFIBP2Q8ND30 876 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 RNF34Q969K3 372 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 TMEM209Q96SK2 561 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 TTC1Q99614 292 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 ZNF184Q99676 751 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-204ENST00000501271 GPR22Q99680 433 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 APBA2Q99767 749 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 GATA5Q9BWX5 397 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-204ENST00000501271 C1QTNF1Q9BXJ1 281 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 CDY1Q9Y6F8 540 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 LOC100653049A0A140TA62 436 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 TMEM114B3SHH9 223 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 DFFAO00273 331 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 PHGDHO43175 533 aaKnown RBP10.03□□□□□ -0.8
CLIP1-204ENST00000501271 CACNG3O60359 315 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 TRIM13O60858 407 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 ZMPSTE24O75844 475 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 KRT34O76011 436 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 PDE5AO76074 875 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 CELF2O95319 508 aaKnown RBP10.03□□□□□ -0.8
CLIP1-204ENST00000501271 CHRNA1P02708 482 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 SBK3P0C264 359 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 SKIP12755 728 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 SAT1P21673 171 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 MPSTP25325 297 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 PCSK1P29120 753 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 CCR10P46092 362 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 EPHB1P54762 984 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 AP2B1P63010 937 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 FKBP1BP68106 108 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 ANO4Q32M45 955 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 NAPEPLDQ6IQ20 393 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 IRGCQ6NXR0 463 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 ZC3HC1Q86WB0 502 aaKnown RBP10.03□□□□□ -0.8
CLIP1-204ENST00000501271 ARHGAP12Q8IWW6 846 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 TMEM151AQ8N4L1 468 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 TDRD5Q8NAT2 981 aaKnown RBP10.03□□□□□ -0.8
CLIP1-204ENST00000501271 SCAMP5Q8TAC9 235 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 HASPINQ8TF76 798 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 IRGQQ8WZA9 623 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 OR52B2Q96RD2 323 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 KIFC1Q9BW19 673 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 SENP6Q9GZR1 1112 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-204ENST00000501271 SIK2Q9H0K1 926 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 CYP4F11Q9HBI6 524 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 GPAMQ9HCL2 828 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 OXSMQ9NWU1 459 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 Q9Y3F1 56 aa10.03□□□□□ -0.8
CLIP1-204ENST00000501271 MIA3Q5JRA6 1907 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 CCNT2O60583 730 aaKnown RBP10.02□□□□□ -0.81
CLIP1-204ENST00000501271 POMCP01189 267 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 IGLV3-25P01717 112 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 CD1EP15812 388 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 ITGAXP20702 1163 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 GABRB3P28472 473 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 AVPR1AP37288 418 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 BRCC3P46736 316 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 ZNF135P52742 658 aaPredicted RBP10.02□□□□□ -0.81
CLIP1-204ENST00000501271 BTKQ06187 659 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 PRPSAP1Q14558 356 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 CFAP157Q5JU67 520 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 GDF6Q6KF10 455 aaPredicted RBP10.02□□□□□ -0.81
CLIP1-204ENST00000501271 FAM171BQ6P995 826 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 RAPH1Q70E73 1250 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 KLHDC8BQ8IXV7 354 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 OR10T2Q8NGX3 314 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 PKMYT1Q99640 499 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 ACE2Q9BYF1 805 aaPredicted RBP10.02□□□□□ -0.81
CLIP1-204ENST00000501271 RHOJQ9H4E5 214 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 TASP1Q9H6P5 420 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 AGO3Q9H9G7 860 aaKnown RBP10.02□□□□□ -0.81
CLIP1-204ENST00000501271 NDE1Q9NXR1 346 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 CDH22Q9UJ99 828 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 BAG2O95816 211 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 SLC35E2BP0CK96 405 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 ODC1P11926 461 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 GLRBP48167 497 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 PGFP49763 221 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 MPP1Q00013 466 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 EIF4EBP2Q13542 120 aaPredicted RBP10.02□□□□□ -0.81
CLIP1-204ENST00000501271 CUL3Q13618 768 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 ZNF460Q14592 562 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 POU6F1Q14863 301 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 ARTNQ5T4W7 220 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms