RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 MXD3Q9BW11 206 aa3.11□□□□□ -1.91
CALD1-221ENST00000489019 SPZ1Q9BXG8 430 aa3.11□□□□□ -1.91
CALD1-221ENST00000489019 FSD1LQ9BXM9 530 aa3.11□□□□□ -1.91
CALD1-221ENST00000489019 RAB34Q9BZG1 259 aa3.11□□□□□ -1.91
CALD1-221ENST00000489019 BHMT2Q9H2M3 363 aa3.11□□□□□ -1.91
CALD1-221ENST00000489019 DHX36Q9H2U1 1008 aaKnown RBP3.11□□□□□ -1.91
CALD1-221ENST00000489019 CPVLQ9H3G5 476 aa3.11□□□□□ -1.91
CALD1-221ENST00000489019 PLCB1Q9NQ66 1216 aa3.11□□□□□ -1.91
CALD1-221ENST00000489019 DDX4Q9NQI0 724 aaKnown RBP3.11□□□□□ -1.91
CALD1-221ENST00000489019 BARHL2Q9NY43 387 aa3.11□□□□□ -1.91
CALD1-221ENST00000489019 MTMR4Q9NYA4 1195 aa3.11□□□□□ -1.91
CALD1-221ENST00000489019 TMOD2Q9NZR1 351 aa3.11□□□□□ -1.91
CALD1-221ENST00000489019 SH3BP4Q9P0V3 963 aa3.11□□□□□ -1.91
CALD1-221ENST00000489019 HDAC9Q9UKV0 1011 aa3.11□□□□□ -1.91
CALD1-221ENST00000489019 GABRQQ9UN88 632 aa3.11□□□□□ -1.91
CALD1-221ENST00000489019 MORC2Q9Y6X9 1032 aaPredicted RBP3.11□□□□□ -1.91
CALD1-221ENST00000489019 BRWD3Q6RI45 1802 aa3.11□□□□□ -1.91
CALD1-221ENST00000489019 MYH1P12882 1939 aa3.11□□□□□ -1.91
CALD1-221ENST00000489019 SNED1Q8TER0 1413 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 BICDL2A1A5D9 508 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 TRIM43BA6NCK2 446 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 TISP43B9A030 160 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 TMEM232C9JQI7 657 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 AKR1B15C9JRZ8 316 aaPredicted RBP3.1□□□□□ -1.91
CALD1-221ENST00000489019 QSOX1O00391 747 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 TPP1O14773 563 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 PPIP5K2O43314 1243 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 FRS3O43559 492 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 CYTH3O43739 400 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 RRP9O43818 475 aaKnown RBP3.1□□□□□ -1.91
CALD1-221ENST00000489019 JTBO76095 146 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 LATS1O95835 1130 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 TUBB4AP04350 444 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 CELA2AP08217 269 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 PDHBP11177 359 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 BRAFP15056 766 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 VEGFAP15692 232 aaPredicted RBP3.1□□□□□ -1.91
CALD1-221ENST00000489019 SLC16A2P36021 539 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 CCT6AP40227 531 aaKnown RBP3.1□□□□□ -1.91
CALD1-221ENST00000489019 PRPHP41219 470 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 PPP1R2P41236 205 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 HALP42357 657 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 SLC1A4P43007 532 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 MRPL12P52815 198 aaKnown RBP3.1□□□□□ -1.91
CALD1-221ENST00000489019 CACNB3P54284 484 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 PRKAG1P54619 331 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 FKBP1AP62942 108 aaKnown RBP3.1□□□□□ -1.91
CALD1-221ENST00000489019 ASIC1P78348 528 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 CCZ1BP86790 482 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 CCZ1P86791 482 aaPredicted RBP3.1□□□□□ -1.91
CALD1-221ENST00000489019 GOLGA8FQ08AF8 430 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 GOLGA8DPQ0D2H9 430 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 CUL4BQ13620 913 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 RAB32Q13637 225 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 NPY5RQ15761 445 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 CALCRLQ16602 461 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 CYP1B1Q16678 543 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 GLIPR1L2Q4G1C9 344 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 C3orf38Q5JPI3 329 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 PCID2Q5JVF3 399 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 GPATCH4Q5T3I0 446 aaKnown RBP3.1□□□□□ -1.91
CALD1-221ENST00000489019 ZNF658Q5TYW1 1059 aaPredicted RBP3.1□□□□□ -1.91
CALD1-221ENST00000489019 KRT79Q5XKE5 535 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 SPECC1LQ69YQ0 1117 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 SLC9A4Q6AI14 798 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 ARMCX5Q6P1M9 558 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 NAPRTQ6XQN6 538 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 ZNF66Q6ZN08 573 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 DPY19L3Q6ZPD9 716 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 Q6ZWC4 215 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 PARS2Q7L3T8 475 aaKnown RBP3.1□□□□□ -1.91
CALD1-221ENST00000489019 RASGRP2Q7LDG7 609 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 CHST15Q7LFX5 561 aaPredicted RBP3.1□□□□□ -1.91
CALD1-221ENST00000489019 KCTD20Q7Z5Y7 419 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 VSTM4Q8IW00 320 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 FAM114A1Q8IWE2 563 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 IZUMO1Q8IYV9 350 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 ADGRF4Q8IZF3 695 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 CPXCR1Q8N123 301 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 CCAR2Q8N163 923 aaKnown RBP3.1□□□□□ -1.91
CALD1-221ENST00000489019 CERS5Q8N5B7 392 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 RP9Q8TA86 221 aaKnown RBP3.1□□□□□ -1.91
CALD1-221ENST00000489019 OSCP1Q8WVF1 389 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 NELFBQ8WX92 580 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 CUL5Q93034 780 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 GJA10Q969M2 543 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 PPP2R3CQ969Q6 453 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 TRIM43Q96BQ3 446 aaPredicted RBP3.1□□□□□ -1.91
CALD1-221ENST00000489019 AK8Q96MA6 479 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 BAG1Q99933 345 aaPredicted RBP3.1□□□□□ -1.91
CALD1-221ENST00000489019 THAP7Q9BT49 309 aaPredicted RBP3.1□□□□□ -1.91
CALD1-221ENST00000489019 ZNF518BQ9C0D4 1074 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 CCSER1Q9C0I3 900 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 LRRC27Q9C0I9 530 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 ZMYND12Q9H0C1 365 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 CUEDC2Q9H467 287 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 MAGEF1Q9HAY2 307 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 GBA2Q9HCG7 927 aaPredicted RBP3.1□□□□□ -1.91
CALD1-221ENST00000489019 XPNPEP3Q9NQH7 507 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 SAMSN1Q9NSI8 373 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms