RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 CNNM3Q8NE01 707 aa5.91□□□□□ -1.46
NHLRC3-205ENST00000485407 ATOH1Q92858 354 aaPredicted RBP5.91□□□□□ -1.46
NHLRC3-205ENST00000485407 EID2BQ96D98 161 aa5.91□□□□□ -1.46
NHLRC3-205ENST00000485407 NLRP4Q96MN2 994 aa5.91□□□□□ -1.46
NHLRC3-205ENST00000485407 COG8Q96MW5 612 aa5.91□□□□□ -1.46
NHLRC3-205ENST00000485407 TIGD1Q96MW7 591 aa5.91□□□□□ -1.46
NHLRC3-205ENST00000485407 CLIC6Q96NY7 704 aa5.91□□□□□ -1.46
NHLRC3-205ENST00000485407 RAD9AQ99638 391 aa5.91□□□□□ -1.46
NHLRC3-205ENST00000485407 DPH1Q9BZG8 443 aa5.91□□□□□ -1.46
NHLRC3-205ENST00000485407 LMAN2LQ9H0V9 348 aa5.91□□□□□ -1.46
NHLRC3-205ENST00000485407 POLR3FQ9H1D9 316 aaPredicted RBP5.91□□□□□ -1.46
NHLRC3-205ENST00000485407 CHST8Q9H2A9 424 aa5.91□□□□□ -1.46
NHLRC3-205ENST00000485407 TNMDQ9H2S6 317 aa5.91□□□□□ -1.46
NHLRC3-205ENST00000485407 FZD8Q9H461 694 aa5.91□□□□□ -1.46
NHLRC3-205ENST00000485407 LANCL2Q9NS86 450 aa5.91□□□□□ -1.46
NHLRC3-205ENST00000485407 PRMT7Q9NVM4 692 aaPredicted RBP5.91□□□□□ -1.46
NHLRC3-205ENST00000485407 NKIRAS2Q9NYR9 191 aa5.91□□□□□ -1.46
NHLRC3-205ENST00000485407 CHMP5Q9NZZ3 219 aa5.91□□□□□ -1.46
NHLRC3-205ENST00000485407 AJAP1Q9UKB5 411 aaPredicted RBP5.91□□□□□ -1.46
NHLRC3-205ENST00000485407 YBX2Q9Y2T7 364 aaKnown RBP5.91□□□□□ -1.46
NHLRC3-205ENST00000485407 MED16Q9Y2X0 877 aa5.91□□□□□ -1.46
NHLRC3-205ENST00000485407 TECTAO75443 2155 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 ASH1LQ9NR48 2969 aaKnown RBP5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 A0A087WWV3 80 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 A0A1B0GUA9 196 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 K7ERI5 159 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 RASSF9O75901 435 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 ERLIN2O94905 339 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 FSBPO95073 299 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 CD1AP06126 327 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 DBHP09172 617 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 JUPP14923 745 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 GABRB3P28472 473 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 SSTR4P31391 388 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 STAT6P42226 847 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 AARSP49588 968 aaKnown RBP eCLIP5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 HK2P52789 917 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 NOMO3P69849 1222 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 CD83Q01151 205 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 MBTD1Q05BQ5 628 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 CUL4BQ13620 913 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 CAPSQ13938 189 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 GIT2Q14161 759 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 EMC10Q5UCC4 262 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 LMBRD2Q68DH5 695 aaPredicted RBP5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 NOTUMQ6P988 496 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 TEPPQ6URK8 271 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 CATSPER4Q7RTX7 472 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 MYOCDQ8IZQ8 938 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 ZNF480Q8WV37 535 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 STON2Q8WXE9 905 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 CCDC34Q96HJ3 373 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 NELL2Q99435 816 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 ADAM2Q99965 735 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 LSM14BQ9BX40 385 aaKnown RBP5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 ST6GALNAC4Q9H4F1 302 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 BCO1Q9HAY6 547 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 PARVGQ9HBI0 331 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 AGPAT5Q9NUQ2 364 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 TMEM140Q9NV12 185 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 PCMTD2Q9NV79 361 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 TMEM161AQ9NX61 479 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 SAE1Q9UBE0 346 aaPredicted RBP5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 SEL1LQ9UBV2 794 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 HPSEQ9Y251 543 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 PAXBP1Q9Y5B6 917 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 PCDHB7Q9Y5E2 793 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 SPTBN2O15020 2390 aa5.9□□□□□ -1.46
NHLRC3-205ENST00000485407 COL4A6Q14031 1691 aa5.9□□□□□ -1.47
NHLRC3-205ENST00000485407 EP300Q09472 2414 aaPredicted RBP5.9□□□□□ -1.47
NHLRC3-205ENST00000485407 NAV2Q8IVL1 2488 aa5.9□□□□□ -1.47
NHLRC3-205ENST00000485407 ZMYM2Q9UBW7 1377 aa5.9□□□□□ -1.47
NHLRC3-205ENST00000485407 PLXNA3P51805 1871 aa5.9□□□□□ -1.47
NHLRC3-205ENST00000485407 GBF1Q92538 1859 aa5.9□□□□□ -1.47
NHLRC3-205ENST00000485407 PTPRSQ13332 1948 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 ZFYVE26Q68DK2 2539 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 MYO7AQ13402 2215 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 PVALEFA0A1B0GWK0 134 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 FRMD3A2A2Y4 597 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 GOLGA6L4A6NEF3 574 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 LRRIQ4A6NIV6 560 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 CCDC169A6NNP5 214 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 F5H0A9 414 aaPredicted RBP5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 H0Y858 1186 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 INO80B-WBP1J3KQ70 363 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 POLR2DO15514 142 aaKnown RBP5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 DAPK3O43293 454 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 TSPAN1O60635 241 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 TBCAO75347 108 aaKnown RBP5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 FAM155BO75949 473 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 USP1O94782 785 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 ACTL6BO94805 426 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 RTN3O95197 1032 aaPredicted RBP5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 ABHD16AO95870 558 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 GAP43P17677 238 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 HOXA11P31270 313 aaPredicted RBP5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 NPTX2P47972 431 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 PRKAA2P54646 552 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 DRG2P55039 364 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms