RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, human

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2B-208	ENST00000478188	GOLGA1	Q92805	767 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	ARHGEF26	Q96DR7	871 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	NSMCE3	Q96MG7	304 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	DDX50	Q9BQ39	737 aa	Known RBP	4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	XPO4	Q9C0E2	1151 aa	Known RBP	4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	PABPC3	Q9H361	631 aa	Known RBP	4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	ADAM22	Q9P0K1	906 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	KIAA1522	Q9P206	1035 aa	Predicted RBP	4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	SLCO3A1	Q9UIG8	710 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	ASPM	Q8IZT6	3477 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	SHROOM3	Q8TF72	1996 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	SPTBN4	Q9H254	2564 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	TARSL2	A2RTX5	802 aa	Known RBP	4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	CAPN9	O14815	690 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	CLDN11	O75508	207 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	MT-CO1	P00395	513 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	F9	P00740	461 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	CYP1A2	P05177	515 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	SKIL	P12757	684 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	SRC	P12931	536 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	PDGFRA	P16234	1089 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	IL1R2	P27930	398 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	GBP1	P32455	592 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	HOXD12	P35452	270 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	TAS2R38	P59533	333 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	ZBED6	P86452	979 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	SLC25A11	Q02978	314 aa	Known RBP	4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	CCDC6	Q16204	474 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	ASIC2	Q16515	512 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	RSPO4	Q2I0M5	234 aa	Predicted RBP	4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	ACBD5	Q5T8D3	534 aa	Predicted RBP	4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	PRR23B	Q6ZRT6	265 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	PIP4P1	Q86T03	277 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	SETD3	Q86TU7	594 aa	Predicted RBP	4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	VSTM4	Q8IW00	320 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	ARHGAP12	Q8IWW6	846 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	CHPF	Q8IZ52	775 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	CARNMT1	Q8N4J0	409 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	DCAF4L2	Q8NA75	395 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	BAHD1	Q8TBE0	780 aa	Predicted RBP	4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	FAM172A	Q8WUF8	416 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	CALR3	Q96L12	384 aa	Known RBP	4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	MCEE	Q96PE7	176 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	SPAG5	Q96R06	1193 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	RTKN	Q9BST9	563 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	PCED1A	Q9H1Q7	454 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	RETREG1	Q9H6L5	497 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	LRRC19	Q9H756	370 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	PRDM16	Q9HAZ2	1276 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	OSGEP	Q9NPF4	335 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	VPS45	Q9NRW7	570 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	GPR27	Q9NS67	375 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	MPP6	Q9NZW5	540 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	IFNK	Q9P0W0	207 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	STIM2	Q9P246	746 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	VPS51	Q9UID3	782 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	SARDH	Q9UL12	918 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	STAP1	Q9ULZ2	295 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	CYP8B1	Q9UNU6	501 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	CEP83	Q9Y592	693 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	ACTL7A	Q9Y615	435 aa		4.35	□□□□□ -1.71
POLR2B-208	ENST00000478188	CEP250	Q9BV73	2442 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	BPTF	Q12830	3046 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	SPEG	Q15772	3267 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	MYLK	Q15746	1914 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188		A0A087X0T9	212 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	ILVBL	A1L0T0	632 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	UPK3BL1	B0FP48	263 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	UPK3BL2	E5RIL1	263 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	SMAD6	O43541	496 aa	Known RBP	4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	SNAP91	O60641	907 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	LILRA1	O75019	489 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	RTN2	O75298	545 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	LRCH4	O75427	683 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	ALDH1A2	O94788	518 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	RHOBTB1	O94844	696 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	LRIG2	O94898	1065 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	ADRB1	P08588	477 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	FAM228B	P0C875	321 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	ITPKA	P23677	461 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	CD6	P30203	668 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	ECT2L	Q008S8	904 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	ZBTB16	Q05516	673 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	DPYS	Q14117	519 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	TCEAL1	Q15170	157 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	SKOR2	Q2VWA4	1001 aa	Predicted RBP	4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	USP39	Q53GS9	565 aa	Known RBP	4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	RABGAP1L	Q5R372	815 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	AGBL4	Q5VU57	503 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	SFMBT2	Q5VUG0	894 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	USP30	Q70CQ3	517 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	DRC7	Q8IY82	874 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	CADM4	Q8NFZ8	388 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	NETO1	Q8TDF5	533 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	ARHGEF2	Q92974	986 aa	Known RBP	4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	ERLEC1	Q96DZ1	483 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	CNPY3	Q9BT09	278 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	WDCP	Q9H6R7	721 aa		4.34	□□□□□ -1.71
POLR2B-208	ENST00000478188	GMEB2	Q9UKD1	530 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms