RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 CYP4B1P13584 511 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 GSTM2P28161 218 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 TYK2P29597 1187 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 DEKP35659 375 aaKnown RBP3.64□□□□□ -1.83
VPS8-215ENST00000460158 KRT20P35900 424 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 TSPAN7P41732 249 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 RPS6KA3P51812 740 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 SNX16P57768 344 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 RPS13P62277 151 aaKnown RBP3.64□□□□□ -1.83
VPS8-215ENST00000460158 RHAGQ02094 409 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 MTX3Q5HYI7 312 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 SH2D4BQ5SQS7 431 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 ATG16L1Q676U5 607 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 ZNF626Q68DY1 528 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 DENND1BQ6P3S1 775 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 FAM57BQ71RH2 274 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 KLBQ86Z14 1044 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 TMTC1Q8IUR5 882 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 BRSK2Q8IWQ3 736 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 TMEM217Q8N7C4 229 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 ARL10Q8N8L6 244 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 USP38Q8NB14 1042 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 TBC1D31Q96DN5 1066 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 RNFT2Q96EX2 444 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 NUDT16L1Q9BRJ7 211 aaKnown RBP3.64□□□□□ -1.83
VPS8-215ENST00000460158 ANP32EQ9BTT0 268 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 CENPOQ9BU64 300 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 FRMD8Q9BZ67 464 aaPredicted RBP3.64□□□□□ -1.83
VPS8-215ENST00000460158 Q9N2J8 555 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 TMEM248Q9NWD8 314 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 GJD2Q9UKL4 321 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 UTS2RQ9UKP6 389 aa3.64□□□□□ -1.83
VPS8-215ENST00000460158 MAGED1Q9Y5V3 778 aaPredicted RBP3.64□□□□□ -1.83
VPS8-215ENST00000460158 C17orf100A8MU93 164 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 EYA2O00167 538 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 PEX12O00623 359 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 MSI1O43347 362 aaKnown RBP3.63□□□□□ -1.83
VPS8-215ENST00000460158 TSPAN3O60637 253 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 METTL18O95568 372 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 TPM2P07951 284 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 CYP19A1P11511 503 aaPredicted RBP3.63□□□□□ -1.83
VPS8-215ENST00000460158 TNNT1P13805 278 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 ITGB6P18564 788 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 PEX19P40855 299 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 RAD52P43351 418 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 TNNT2P45379 298 aaPredicted RBP3.63□□□□□ -1.83
VPS8-215ENST00000460158 ABCG1P45844 678 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 OAZ1P54368 228 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 SSBP2P81877 361 aaPredicted RBP3.63□□□□□ -1.83
VPS8-215ENST00000460158 ARHGAP8P85298 464 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 PLIN5Q00G26 463 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 ID2Q02363 134 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 TLE2Q04725 743 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 BYSLQ13895 437 aaKnown RBP3.63□□□□□ -1.83
VPS8-215ENST00000460158 GALNT3Q14435 633 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 EZH2Q15910 746 aaKnown RBP3.63□□□□□ -1.83
VPS8-215ENST00000460158 AP5B1Q2VPB7 878 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 Q4G0T1 1027 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 MIDNQ504T8 468 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 INTS11Q5TA45 600 aaKnown RBP3.63□□□□□ -1.83
VPS8-215ENST00000460158 GALNT7Q86SF2 657 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 AFAP1L1Q8TED9 768 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 HDAC2Q92769 488 aaKnown RBP3.63□□□□□ -1.83
VPS8-215ENST00000460158 CUL5Q93034 780 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 ZBTB10Q96DT7 871 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 SLC26A6Q9BXS9 759 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 UNC45AQ9H3U1 944 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 STN1Q9H668 368 aaKnown RBP3.63□□□□□ -1.83
VPS8-215ENST00000460158 ZNF304Q9HCX3 659 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 NRIP3Q9NQ35 241 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 TBC1D22BQ9NU19 505 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 BLOC1S4Q9NUP1 217 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 TMEM45AQ9NWC5 275 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 IFT80Q9P2H3 777 aaPredicted RBP3.63□□□□□ -1.83
VPS8-215ENST00000460158 PDP2Q9P2J9 529 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.63□□□□□ -1.83
VPS8-215ENST00000460158 HDAC6Q9UBN7 1215 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 UPB1Q9UBR1 384 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 CD207Q9UJ71 328 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 GDAQ9Y2T3 454 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 SNX5Q9Y5X3 404 aa3.63□□□□□ -1.83
VPS8-215ENST00000460158 TRBV5-3A0A0A0MS03 114 aa3.62□□□□□ -1.83
VPS8-215ENST00000460158 ANKRD18BA2A2Z9 1011 aa3.62□□□□□ -1.83
VPS8-215ENST00000460158 DPPA5A6NC42 116 aa3.62□□□□□ -1.83
VPS8-215ENST00000460158 TSPY2A6NKD2 308 aa3.62□□□□□ -1.83
VPS8-215ENST00000460158 RHODO00212 210 aa3.62□□□□□ -1.83
VPS8-215ENST00000460158 HOXC11O43248 304 aaPredicted RBP3.62□□□□□ -1.83
VPS8-215ENST00000460158 CCNT1O60563 726 aaKnown RBP3.62□□□□□ -1.83
VPS8-215ENST00000460158 TLR2O60603 784 aa3.62□□□□□ -1.83
VPS8-215ENST00000460158 NEURL1O76050 574 aa3.62□□□□□ -1.83
VPS8-215ENST00000460158 GFPT2O94808 682 aa3.62□□□□□ -1.83
VPS8-215ENST00000460158 WEE2P0C1S8 567 aa3.62□□□□□ -1.83
VPS8-215ENST00000460158 TSPY3P0CV98 308 aa3.62□□□□□ -1.83
VPS8-215ENST00000460158 TSPY8P0CW00 308 aa3.62□□□□□ -1.83
VPS8-215ENST00000460158 CAPN3P20807 821 aa3.62□□□□□ -1.83
VPS8-215ENST00000460158 PSMA3P25788 255 aa3.62□□□□□ -1.83
VPS8-215ENST00000460158 CIITAP33076 1130 aa3.62□□□□□ -1.83
VPS8-215ENST00000460158 CTNNA1P35221 906 aaKnown RBP3.62□□□□□ -1.83
VPS8-215ENST00000460158 UBA7P41226 1012 aa3.62□□□□□ -1.83
VPS8-215ENST00000460158 STAT1P42224 750 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms