RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 ZNF335Q9H4Z2 1342 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 DDAH2O95865 285 aa4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 FGF2P09038 288 aa4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 PRKCHP24723 683 aa4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 PSMC2P35998 433 aaKnown RBP4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 PGM1P36871 562 aa4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 LIFRP42702 1097 aa4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 PLCD1P51178 756 aa4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 SRSF1Q07955 248 aaKnown RBP eCLIP4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 RBMS2Q15434 407 aaKnown RBP4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 SLC18A3Q16572 532 aa4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 ENTPD8Q5MY95 495 aa4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 TTC39AQ5SRH9 613 aa4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 AAGABQ6PD74 315 aa4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 LRRC8DQ7L1W4 858 aa4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 TRIM74Q86UV6 250 aa4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 TRIM73Q86UV7 250 aa4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 ANKRD13BQ86YJ7 626 aa4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 GPSM1Q86YR5 675 aa4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 SLC44A5Q8NCS7 719 aa4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 RUFY2Q8WXA3 655 aa4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 ELP4Q96EB1 424 aa4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 ZFYVE19Q96K21 471 aa4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 TRNAU1APQ9NX07 287 aaKnown RBP4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 ZDHHC7Q9NXF8 308 aa4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 MSRB1Q9NZV6 116 aa4.89□□□□□ -1.63
HMGB3P6-201ENST00000444896 GOLGA3Q08378 1498 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 OR6C68A6NDL8 312 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 TMEM247A6NEH6 219 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 A6NLC8 198 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 A6NNC1 897 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 TULP3O75386 442 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 CHRNB1P11230 501 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 PRF1P14222 555 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 SLC16A2P36021 539 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 MMP13P45452 471 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 NR1H2P55055 460 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 GOLGA8FQ08AF8 430 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 TDGQ13569 410 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 RPE65Q16518 533 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 TBC1D9BQ66K14 1250 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 C11orf87Q6NUJ2 197 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 SHC4Q6S5L8 630 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 B4GALNT4Q76KP1 1039 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 KDELC2Q7Z4H8 507 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 CCDC25Q86WR0 208 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 PIGOQ8TEQ8 1089 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 HDAC7Q8WUI4 952 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 FAR1Q8WVX9 515 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 RAB40AQ8WXH6 277 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 SMG7Q92540 1137 aaKnown RBP4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 RPL36ALQ969Q0 106 aaKnown RBP4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 SH3KBP1Q96B97 665 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 CD180Q99467 661 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 FUZQ9BT04 418 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 AGXT2Q9BYV1 514 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 CXorf56Q9H5V9 222 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 UBN1Q9NPG3 1134 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 TUBA8Q9NY65 449 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 SUFUQ9UMX1 484 aa4.88□□□□□ -1.63
HMGB3P6-201ENST00000444896 PER2O15055 1255 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 FGBP02675 491 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 XBP1P17861 261 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 POU5F1BQ06416 359 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 NAA25Q14CX7 972 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 RABEP1Q15276 862 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 ETFDHQ16134 617 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 BAK1Q16611 211 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 NFIL3Q16649 462 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 SYTL3Q4VX76 610 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 JAKMIP3Q5VZ66 844 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 TMEM268Q5VZI3 342 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 CCDC70Q6NSX1 233 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 HMBOX1Q6NT76 420 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 KDM1BQ8NB78 822 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 CMASQ8NFW8 434 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 RFWD2Q8NHY2 731 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 DENND1AQ8TEH3 1009 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 ST8SIA4Q92187 359 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 RRP36Q96EU6 259 aaKnown RBP4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 PPM1MQ96MI6 270 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 ZNF778Q96MU6 729 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 TEFMQ96QE5 360 aaKnown RBP4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 TTYH1Q9H313 450 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 ACTR5Q9H9F9 607 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 ATP8A2Q9NTI2 1148 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 RNF7Q9UBF6 113 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 ZNF70Q9UC06 446 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 TBX20Q9UMR3 447 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 PCDHA12Q9UN75 941 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 COG5Q9UP83 839 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 CLDN16Q9Y5I7 305 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 TNIKQ9UKE5 1360 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 CEP162Q5TB80 1403 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 CEP164Q9UPV0 1460 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 SYNJ1O43426 1573 aa4.87□□□□□ -1.63
HMGB3P6-201ENST00000444896 KIF21BO75037 1637 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 GOLGA6L10A0A0M3HER8 536 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 STRNO43815 780 aa4.86□□□□□ -1.63
HMGB3P6-201ENST00000444896 CBX6O95503 412 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms