RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 KMOO15229 486 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 ACOX3O15254 700 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 LIMK1P53667 647 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 CDH15P55291 814 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 CTF1Q16619 201 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 NRF1Q16656 503 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 USP43Q70EL4 1123 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 EPHX4Q8IUS5 362 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 CCDC60Q8IWA6 550 aaPredicted RBP5.23□□□□□ -1.57
RIF1-203ENST00000428287 ELMOD1Q8N336 334 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 SLC15A4Q8N697 577 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 SH3YL1Q96HL8 342 aaPredicted RBP5.23□□□□□ -1.57
RIF1-203ENST00000428287 NGLY1Q96IV0 654 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 RMND5AQ9H871 391 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 SP140LQ9H930 580 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 NOX1Q9Y5S8 564 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 PTPRJQ12913 1337 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 MGEA5O60502 916 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 P4HBP07237 508 aaKnown RBP5.23□□□□□ -1.57
RIF1-203ENST00000428287 RALBP11234 206 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 HSD17B1P14061 328 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 PMS2P3Q13401 168 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 SEMA5AQ13591 1074 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 TFDP2Q14188 446 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 SELPLGQ14242 412 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 PPP2R5DQ14738 602 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 SUZ12Q15022 739 aaKnown RBP5.23□□□□□ -1.57
RIF1-203ENST00000428287 SAMD4BQ5PRF9 694 aaKnown RBP5.23□□□□□ -1.57
RIF1-203ENST00000428287 MFSD14BQ5SR56 506 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 SLC9A4Q6AI14 798 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 ERMP1Q7Z2K6 904 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 TRIM50Q86XT4 487 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 PTRH1Q86Y79 214 aaKnown RBP5.23□□□□□ -1.57
RIF1-203ENST00000428287 TRPV3Q8NET8 790 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 ZNF526Q8TF50 670 aaPredicted RBP5.23□□□□□ -1.57
RIF1-203ENST00000428287 TMEM79Q9BSE2 394 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 CAAP1Q9H8G2 361 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 WDR41Q9HAD4 459 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 ERVK-11Q9UQG0 969 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 RAP2CQ9Y3L5 183 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 H0YAE9 185 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 GOLGA8SH3BPF8 625 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 GOLGA8MH3BSY2 632 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 GRID2O43424 1007 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 APOA4P06727 396 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 BMP1P13497 986 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 CCNA2P20248 432 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 NR2C2P49116 596 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 MERTKQ12866 999 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 DGKDQ16760 1214 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 C2CD6Q53TS8 623 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 ZNF484Q5JVG2 852 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 TDRD10Q5VZ19 366 aaKnown RBP5.23□□□□□ -1.57
RIF1-203ENST00000428287 PDPK2PQ6A1A2 396 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 PIWIL4Q7Z3Z4 852 aaKnown RBP5.23□□□□□ -1.57
RIF1-203ENST00000428287 CPXM1Q96SM3 734 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 CIB1Q99828 191 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 NPLQ9BXD5 320 aaPredicted RBP5.23□□□□□ -1.57
RIF1-203ENST00000428287 SDCBP2Q9H190 292 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 XYLT2Q9H1B5 865 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 AKIP1Q9NQ31 210 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 OBSL1O75147 1896 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 TNFRSF10AO00220 468 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 TRIM13O60858 407 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 BANF1O75531 89 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 PAX3P23760 479 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 CD40LGP29965 261 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 GNA15P30679 374 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 OPRL1P41146 370 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 NLRP11P59045 1033 aaKnown RBP5.23□□□□□ -1.57
RIF1-203ENST00000428287 NR1D2Q14995 579 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 STILQ15468 1287 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 ERFEQ4G0M1 354 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 ZBTB49Q6ZSB9 765 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 CAPN12Q6ZSI9 719 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 ZCCHC23Q6ZST2 131 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 HERC6Q8IVU3 1022 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 ZNF781Q8N8C0 355 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 KIAA1958Q8N8K9 716 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 TSPEARQ8WU66 669 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 MCRS1Q96EZ8 462 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 RNF157Q96PX1 679 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 SIGLEC11Q96RL6 698 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 TRAF4Q9BUZ4 470 aaPredicted RBP5.23□□□□□ -1.57
RIF1-203ENST00000428287 HOXD1Q9GZZ0 328 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 ARMC7Q9H6L4 198 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 NARFQ9UHQ1 456 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 ADAMTS9Q9P2N4 1935 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 FER1L5A0AVI2 2057 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 ANKRD34BA5PLL1 514 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 KDM1AO60341 852 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 NPTX2P47972 431 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 STX5Q13190 355 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 RAB39AQ14964 217 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 PTPN20Q4JDL3 420 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 LCN8Q6JVE9 175 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 UNC5AQ6ZN44 842 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 TTC39CQ8N584 583 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 HDAC2Q92769 488 aaKnown RBP5.22□□□□□ -1.57
RIF1-203ENST00000428287 MED30Q96HR3 178 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms