RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 TTC3P53804 2025 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 TFEBP19484 476 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 GABRB2P47870 512 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 PTK2BQ14289 1009 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 CAPRIN1Q14444 709 aaKnown RBP13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 BNC2Q6ZN30 1099 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 KYQ8NBH2 561 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 C7orf26Q96N11 449 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 WDR41Q9HAD4 459 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 SIRPGQ9P1W8 387 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 FAM8A1Q9UBU6 413 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 SYNPO2Q9UMS6 1093 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 CNTN6Q9UQ52 1028 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 GON4LQ3T8J9 2241 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 PDLIM1O00151 329 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 TIPRLO75663 272 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 DHRS4L1P0CG22 281 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 MS4A2Q01362 244 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 SEMA5AQ13591 1074 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 HOMEZQ8IX15 550 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 CYGBQ8WWM9 190 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 GCOM2Q9BZD3 368 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 CNTN3Q9P232 1028 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 BTRCQ9Y297 605 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 TDRKHQ9Y2W6 561 aaKnown RBP13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 AP4B1Q9Y6B7 739 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 ERI2A8K979 691 aaKnown RBP13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 HNRNPCL1O60812 293 aaKnown RBP13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 GALK1P51570 392 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 ZBTB17Q13105 803 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 ITGA7Q13683 1181 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 ANKRD20A4Q4UJ75 823 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 APOBEC3FQ8IUX4 373 aaKnown RBP13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 DCUN1D1Q96GG9 259 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 SEPHS2Q99611 448 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 CCT7Q99832 543 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 BRD8Q9H0E9 1235 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 STAP1Q9ULZ2 295 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 SMIM28A0A1B0GU29 152 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 ABLIM1O14639 778 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 PIGRP01833 764 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 PGAM1P18669 254 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 YWHAQP27348 245 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 BCAT1P54687 386 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 MAP7Q14244 749 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 KRT72Q14CN4 511 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 GPRIN1Q7Z2K8 1008 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 ZNF786Q8N393 782 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 FNIP1Q8TF40 1166 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 SLC35F5Q8WV83 523 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 EXOC2Q96KP1 924 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 DHRS4Q9BTZ2 278 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 BCO2Q9BYV7 579 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 NOL11Q9H8H0 719 aaKnown RBP13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 LRRC40Q9H9A6 602 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 GNEQ9Y223 722 aaKnown RBP13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 CDYLQ9Y232 598 aa13.42□□□□□ -0.26
TNFRSF8-203ENST00000417814 LRRC14BA6NHZ5 514 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 TRDMT1O14717 391 aaKnown RBP13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 TREHO43280 583 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 CHRM3P20309 590 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 BRCC3P46736 316 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 IREB2P48200 963 aaKnown RBP13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 WASHC5Q12768 1159 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 TLR1Q15399 786 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 TEX44Q53QW1 395 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 MARK2Q7KZI7 788 aaKnown RBP13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 RIOX2Q8IUF8 465 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 NPWQ8N729 165 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 UBR7Q8N806 425 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 ZNF398Q8TD17 642 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 POMKQ9H5K3 350 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 GJD2Q9UKL4 321 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 FAF1Q9UNN5 650 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 CDY2AQ9Y6F7 541 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 CDY1Q9Y6F8 540 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 COL5A3P25940 1745 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 FAM159BA6NKW6 160 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 CAPN14A8MX76 684 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 NR5A2O00482 541 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 MCF2P10911 925 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 ZIK1Q3SY52 487 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 OTUD3Q5T2D3 398 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 FBXL19Q6PCT2 694 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 OSTM1Q86WC4 334 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 FSTL5Q8N475 847 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 B3GALNT2Q8NCR0 500 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 FAM110BQ8TC76 370 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 BLOC1S5Q8TDH9 187 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 TMEM40Q8WWA1 233 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 LRTOMTQ8WZ04 291 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 PKP2Q99959 881 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 SPON2Q9BUD6 331 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 ALG9Q9H6U8 611 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 PPCSQ9HAB8 311 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 VCX3AQ9NNX9 186 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 ZBBXA8MT70 800 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 H3BSA7 217 aa13.41□□□□□ -0.26
TNFRSF8-203ENST00000417814 MAGEB3O15480 346 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms