RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 KCNK3O14649 394 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 POLR3GO15318 223 aaPredicted RBP5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 P4HA2O15460 535 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 MAGEB2O15479 319 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 GPAA1O43292 621 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 CYTH3O43739 400 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 RASSF9O75901 435 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 TMCC1O94876 653 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 VIMP08670 466 aaKnown RBP5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 C1SP09871 688 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 TROVE2P10155 538 aaKnown RBP eCLIP5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 KRT15P19012 456 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 GLDCP23378 1020 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 MLH1P40692 756 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 RANBP1P43487 201 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 SCNN1GP51170 649 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 EPHA5P54756 1037 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 ARPC4P59998 168 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 KIR3DS1Q14943 382 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 HLA-BQ31612 363 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 ARL13BQ3SXY8 428 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 CCDC14Q49A88 953 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 HSF5Q4G112 596 aaPredicted RBP5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 ASPRV1Q53RT3 343 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 EMC10Q5UCC4 262 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 FAM171A1Q5VUB5 890 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 EFCAB12Q6NXP0 572 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 MRPL10Q7Z7H8 261 aaKnown RBP5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 PTRH1Q86Y79 214 aaKnown RBP5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 LSMEM2Q8N112 164 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 MYO1HQ8N1T3 1032 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 CBARPQ8N350 705 aaPredicted RBP5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 LRRC71Q8N4P6 559 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 LINC01465Q8N7H1 131 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 PPP1R14CQ8TAE6 165 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 PANK1Q8TE04 598 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 RABGGTAQ92696 567 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 CD101Q93033 1021 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 LRRC45Q96CN5 670 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 TTC14Q96N46 770 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 SMC6Q96SB8 1091 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 VAT1LQ9HCJ6 419 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 HPS4Q9NQG7 708 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 PAPOLBQ9NRJ5 636 aaKnown RBP5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 THSD1Q9NS62 852 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 MTRRQ9UBK8 725 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 TCEAL9Q9UHQ7 104 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 PAIP2BQ9ULR5 123 aaKnown RBP5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 EXOC6BQ9Y2D4 811 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 INSL5Q9Y5Q6 135 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 CDY1Q9Y6F8 540 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 PLXND1Q9Y4D7 1925 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 SLC12A8A0AV02 714 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 PABPN1LA6NDY0 278 aaKnown RBP5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 ARL5CA6NH57 179 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 OTOL1A6NHN0 477 aaPredicted RBP5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 LRRC10BA6NIK2 292 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 AKAP10O43572 662 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 TSPAN6O43657 245 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 ORC4O43929 436 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 MGRN1O60291 552 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 BCAR3O75815 825 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 MED26O95402 600 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 PRAMEF12O95522 483 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 IGHA1P01876 353 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 HNRNPLP14866 589 aaKnown RBP eCLIP5.75□□□□□ -1.491e-9■□□□□ 8.8
ECHDC1-206ENST00000417628 SYT1P21579 422 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 SMARCA1P28370 1054 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 ADRA1BP35368 520 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 CD97P48960 835 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 AARSP49588 968 aaKnown RBP eCLIP5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 NLRP5P59047 1200 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 TUBA4AP68366 448 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 CTAG1AP78358 180 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 OCRLQ01968 901 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 MVKQ03426 396 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 ELAVL2Q12926 359 aaKnown RBP5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 DUSP4Q13115 394 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 INAQ16352 499 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 SGSM1Q2NKQ1 1148 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 ALDH1L2Q3SY69 923 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 WDR45BQ5MNZ6 344 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 SH2D4BQ5SQS7 431 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 CCDC122Q5T0U0 273 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 CCDC70Q6NSX1 233 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 SARM1Q6SZW1 724 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 CEP128Q6ZU80 1094 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 SKAP1Q86WV1 359 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 CCDC33Q8N5R6 958 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 LZTR1Q8N653 840 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 CLRN3Q8NCR9 226 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 ACMSDQ8TDX5 336 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 PIGOQ8TEQ8 1089 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 HASPINQ8TF76 798 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 MIB2Q96AX9 1013 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 VCPIP1Q96JH7 1222 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 ZNF512Q96ME7 567 aaPredicted RBP5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 ALPK1Q96QP1 1244 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 CGREF1Q99674 301 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 SDF4Q9BRK5 362 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms