RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 DHX15O43143 795 aaKnown RBP14.96□□□□□ -0.02
NCKIPSD-204ENST00000416649 CCNE2O96020 404 aa14.96□□□□□ -0.02
NCKIPSD-204ENST00000416649 SAT1P21673 171 aa14.96□□□□□ -0.02
NCKIPSD-204ENST00000416649 TBXAS1P24557 533 aaPredicted RBP14.96□□□□□ -0.02
NCKIPSD-204ENST00000416649 GRM5P41594 1212 aa14.96□□□□□ -0.02
NCKIPSD-204ENST00000416649 BCAR1P56945 870 aa14.96□□□□□ -0.02
NCKIPSD-204ENST00000416649 OSTNP61366 133 aa14.96□□□□□ -0.02
NCKIPSD-204ENST00000416649 LRRC8EQ6NSJ5 796 aa14.96□□□□□ -0.02
NCKIPSD-204ENST00000416649 DENND1BQ6P3S1 775 aa14.96□□□□□ -0.02
NCKIPSD-204ENST00000416649 CHSY3Q70JA7 882 aa14.96□□□□□ -0.02
NCKIPSD-204ENST00000416649 BTLAQ7Z6A9 289 aa14.96□□□□□ -0.02
NCKIPSD-204ENST00000416649 CBR4Q8N4T8 237 aa14.96□□□□□ -0.02
NCKIPSD-204ENST00000416649 SNX31Q8N9S9 440 aa14.96□□□□□ -0.02
NCKIPSD-204ENST00000416649 CDKL2Q92772 493 aa14.96□□□□□ -0.02
NCKIPSD-204ENST00000416649 ANKRD60Q9BZ19 345 aa14.96□□□□□ -0.02
NCKIPSD-204ENST00000416649 EHD1Q9H4M9 534 aa14.96□□□□□ -0.02
NCKIPSD-204ENST00000416649 CYP26B1Q9NR63 512 aa14.96□□□□□ -0.02
NCKIPSD-204ENST00000416649 SMOXQ9NWM0 555 aa14.96□□□□□ -0.02
NCKIPSD-204ENST00000416649 POU2F3Q9UKI9 436 aa14.96□□□□□ -0.02
NCKIPSD-204ENST00000416649 CNOT11Q9UKZ1 510 aaKnown RBP14.96□□□□□ -0.02
NCKIPSD-204ENST00000416649 CDH7Q9ULB5 785 aa14.96□□□□□ -0.02
NCKIPSD-204ENST00000416649 MAGED2Q9UNF1 606 aaPredicted RBP14.96□□□□□ -0.02
NCKIPSD-204ENST00000416649 PCDHA11Q9Y5I1 949 aa14.96□□□□□ -0.02
NCKIPSD-204ENST00000416649 LTBP3Q9NS15 1303 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 KCNU1A8MYU2 1149 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 TRIM38O00635 465 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 NRP1O14786 923 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 PLA2G6O60733 806 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 GRAP2O75791 330 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 BCL10O95999 233 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 S100BP04271 92 aaPredicted RBP14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 PRKCGP05129 697 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 TKTP29401 623 aaKnown RBP14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 ZBTB17Q13105 803 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 SF3B4Q15427 424 aaKnown RBP eCLIP14.95□□□□□ -0.021e-6■■■■■ 30.4
NCKIPSD-204ENST00000416649 SUPT20HL1Q3ZLR7 823 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 SEL1L3Q68CR1 1132 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 GK5Q6ZS86 529 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 KCTD8Q6ZWB6 473 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 NIPA2Q8N8Q9 360 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 ILKAPQ9H0C8 392 aaPredicted RBP14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 ZFYVE28Q9HCC9 887 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 DUS2Q9NX74 493 aaKnown RBP14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 A6NL46 340 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 EXTL3O43909 919 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 ITGBL1O95965 494 aaPredicted RBP14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 CST3P01034 146 aaPredicted RBP14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 LTFP02788 710 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 HMGCRP04035 888 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 INHBBP09529 407 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 GTF2A2P52657 109 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 INAQ16352 499 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 PGS1Q32NB8 556 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 ACDQ96AP0 544 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 FBXL20Q96IG2 436 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 SDCBP2Q9H190 292 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 DGKBQ9Y6T7 804 aa14.95□□□□□ -0.02
NCKIPSD-204ENST00000416649 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 E7ENX8 843 aa14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 KPNA4O00629 521 aaPredicted RBP14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 GMNNO75496 209 aa14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 ERVK-10P10266 1014 aa14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 HDCP19113 662 aa14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 CCNA2P20248 432 aa14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 GSSP48637 474 aa14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 PSME3P61289 254 aa14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 NFATC3Q12968 1075 aa14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 BFSP2Q13515 415 aa14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 DLG2Q15700 870 aa14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 HMBOX1Q6NT76 420 aa14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 BPIFB6Q8NFQ5 453 aa14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 CAB39LQ9H9S4 337 aa14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 CNOT6Q9ULM6 557 aaKnown RBP14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 HES2Q9Y543 173 aa14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 CSADQ9Y600 493 aa14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 JUNP05412 331 aaKnown RBP14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 POLR2BP30876 1174 aaKnown RBP14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 TRIM25Q14258 630 aaKnown RBP14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 NHSL2Q5HYW2 709 aa14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 PITRM1Q5JRX3 1037 aa14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 TIFABQ6ZNK6 161 aa14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 C14orf80Q86SX3 495 aa14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 CADM3Q8N126 398 aa14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 SGF29Q96ES7 293 aa14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 PEBP4Q96S96 227 aa14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 EFHD1Q9BUP0 239 aa14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 SOX17Q9H6I2 414 aaPredicted RBP14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 CISHQ9NSE2 258 aa14.94□□□□□ -0.02
NCKIPSD-204ENST00000416649 C9IYK1 514 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 PIGNO95427 931 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 EEF1DP29692 281 aaKnown RBP14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 PRKCQQ04759 706 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 DNASE1L3Q13609 305 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 TFDP2Q14188 446 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 STILQ15468 1287 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 C15orf59Q2T9L4 293 aaPredicted RBP14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 GATA5Q9BWX5 397 aaPredicted RBP14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 SSC5DA1L4H1 1573 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 PFDN6O15212 129 aa14.93□□□□□ -0.02
NCKIPSD-204ENST00000416649 HDAC3O15379 428 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms