RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 RIT2Q99578 217 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 MTA3Q9BTC8 594 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 GRIP2Q9C0E4 1043 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 RASSF1Q9NS23 344 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 COMMD9Q9P000 198 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 PCDHGB3Q9Y5G1 929 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 A0A096LPK6 155 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 A0A1B0GTH6 734 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 THRAP10827 490 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 SF1Q15637 639 aaKnown RBP11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 PABPC1LQ4VXU2 614 aaKnown RBP11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 BNC2Q6ZN30 1099 aaPredicted RBP11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 MAB21L3Q8N8X9 362 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 NCKIPSDQ9NZQ3 722 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 CCDC167Q9P0B6 97 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 LOC100506127A0A0U1RQW1 187 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 NTRK1P04629 796 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 CCNYL3P0C7X3 344 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 HDCP19113 662 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 PEX6Q13608 980 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 HELQQ8TDG4 1101 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 METTL21AQ8WXB1 218 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 TMEM237Q96Q45 408 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 ZDHHC9Q9Y397 364 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 ADH1CP00326 375 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 ALOX12P18054 663 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 ARL3P36405 182 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 PSMD4P55036 377 aaKnown RBP11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 KLHDC7AQ5VTJ3 777 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 CXCL17Q6UXB2 119 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 C3orf20Q8ND61 904 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 METTL6Q8TCB7 284 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 CNGB3Q9NQW8 809 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 CLIC5Q9NZA1 410 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 MARCH2Q9P0N8 246 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 PHF11Q9UIL8 331 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 TRPV2Q9Y5S1 764 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 MYH7BA7E2Y1 1941 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 KPNA5O15131 536 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 FKTNO75072 461 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 CCNB2O95067 398 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 CREMQ03060 361 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 NR1I3Q14994 352 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 HYIQ5T013 277 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 CDH24Q86UP0 819 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 CNPY4Q8N129 248 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 TRAPPC12Q8WVT3 735 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 AP4S1Q9Y587 144 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 KCNH1O95259 989 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 TBCELQ5QJ74 424 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 KRT74Q7RTS7 529 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 LRRC6Q86X45 466 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 POMKQ9H5K3 350 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 BAZ2AQ9UIF9 1905 aaKnown RBP11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 PDE4DIPQ5VU43 2346 aa11.38□□□□□ -0.59
PRPF40A-202ENST00000410080 NPTX2P47972 431 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 ERVK-9P63128 1117 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 ERVK-24P63145 666 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 PPP1R26Q5T8A7 1209 aaPredicted RBP11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 SMPDL3BQ92485 455 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 FAM126AQ9BYI3 521 aaPredicted RBP11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 ELOVL4Q9GZR5 314 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 C17orf75Q9HAS0 396 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 BARX2Q9UMQ3 279 aaPredicted RBP11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 PCDHB11Q9Y5F2 797 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 CACNB4O00305 520 aaPredicted RBP11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 IGF2BP3O00425 579 aaKnown RBP eCLIP11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 ADCYAP1R1P41586 468 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 OMPP47874 163 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 SNRNP27Q8WVK2 155 aaKnown RBP11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 SERPINB11Q96P15 392 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 ATP13A3Q9H7F0 1226 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 HAO1Q9UJM8 370 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 LOXHD1Q8IVV2 1947 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 RPTORQ8N122 1335 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 NR2F1P10589 423 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 MGAT1P26572 445 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 PON1P27169 355 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 UBXN2BQ14CS0 331 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 ZNF605Q86T29 641 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 TPCN2Q8NHX9 752 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 PPCSQ9HAB8 311 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 DMGDHQ9UI17 866 aaKnown RBP11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 INO80Q9ULG1 1556 aaPredicted RBP11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 USP20Q9Y2K6 914 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 LRCH1Q9Y2L9 728 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 SPEF2Q9C093 1822 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 YBX3P16989 372 aaKnown RBP eCLIP11.37□□□□□ -0.593e-7■■■■■ 28.4
PRPF40A-202ENST00000410080 CD86P42081 329 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 PSMD8P48556 350 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 HSPA13P48723 471 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 TGFB2P61812 414 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 FASTKQ14296 549 aaKnown RBP11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 DEFB115Q30KQ5 88 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 RASGRP2Q7LDG7 609 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 DNAAF5Q86Y56 855 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 SGSM3Q96HU1 749 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 FAM129BQ96TA1 746 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 ABI3Q9P2A4 366 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 H3BNH8 94 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms