RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 APBB2Q92870 758 aa21.35■■□□□ 1.01
CTCF-202ENST00000401394 CIB1Q99828 191 aa21.35■■□□□ 1.01
CTCF-202ENST00000401394 CAAP1Q9H8G2 361 aa21.35■■□□□ 1.01
CTCF-202ENST00000401394 EDNRBP24530 442 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 CD68P34810 354 aaPredicted RBP21.34■■□□□ 1.01
CTCF-202ENST00000401394 COG7P83436 770 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 RARS2Q5T160 578 aaKnown RBP21.34■■□□□ 1.01
CTCF-202ENST00000401394 LBX2Q6XYB7 198 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 NT5DC4Q86YG4 428 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 CEP97Q8IW35 865 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 OR9I1Q8NGQ6 314 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 CPNE1Q99829 537 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 MLPHQ9BV36 600 aaPredicted RBP21.34■■□□□ 1.01
CTCF-202ENST00000401394 GCOM2Q9BZD3 368 aaPredicted RBP21.34■■□□□ 1.01
CTCF-202ENST00000401394 STN1Q9H668 368 aaKnown RBP21.34■■□□□ 1.01
CTCF-202ENST00000401394 SPON1Q9HCB6 807 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 PIGVQ9NUD9 493 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 DNAAF2Q9NVR5 837 aaKnown RBP21.34■■□□□ 1.01
CTCF-202ENST00000401394 OXSMQ9NWU1 459 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 TCAF2A6NFQ2 919 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 M0QYT0 321 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 NRP1O14786 923 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 AURKAO14965 403 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 VAPBO95292 243 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 THRAP10827 490 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 NME5P56597 212 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 HPCAP84074 193 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 STXBP5Q5T5C0 1151 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 OTOP3Q7RTS5 596 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 TICAM1Q8IUC6 712 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 DIS3LQ8TF46 1054 aaKnown RBP21.34■■□□□ 1.01
CTCF-202ENST00000401394 EME1Q96AY2 570 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 SPATC1LQ9H0A9 340 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 ATXN3LQ9H3M9 355 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 CDHR5Q9HBB8 845 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 FZD10Q9ULW2 581 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 CROCCQ5TZA2 2017 aa21.34■■□□□ 1.01
CTCF-202ENST00000401394 A0A0J9YVX5 310 aa21.33■■□□□ 1.01
CTCF-202ENST00000401394 E7ENX8 843 aa21.33■■□□□ 1.01
CTCF-202ENST00000401394 PTPN3P26045 913 aa21.33■■□□□ 1.01
CTCF-202ENST00000401394 RGS2P41220 211 aa21.33■■□□□ 1.01
CTCF-202ENST00000401394 RPL14P50914 215 aaKnown RBP21.33■■□□□ 1.01
CTCF-202ENST00000401394 MPP3Q13368 585 aa21.33■■□□□ 1.01
CTCF-202ENST00000401394 MTX3Q5HYI7 312 aa21.33■■□□□ 1.01
CTCF-202ENST00000401394 KCNMB4Q86W47 210 aa21.33■■□□□ 1.01
CTCF-202ENST00000401394 FSTL5Q8N475 847 aaPredicted RBP21.33■■□□□ 1.01
CTCF-202ENST00000401394 TMEM102Q8N9M5 508 aaPredicted RBP21.33■■□□□ 1.01
CTCF-202ENST00000401394 SPATA22Q8NHS9 363 aa21.33■■□□□ 1.01
CTCF-202ENST00000401394 SIKE1Q9BRV8 207 aa21.33■■□□□ 1.01
CTCF-202ENST00000401394 ATP6AP2A0A1C7CYW4 349 aa21.33■■□□□ 1.01
CTCF-202ENST00000401394 HDAC3O15379 428 aa21.33■■□□□ 1.01
CTCF-202ENST00000401394 ATP6AP2O75787 350 aa21.33■■□□□ 1.01
CTCF-202ENST00000401394 ATICP31939 592 aa21.33■■□□□ 1.01
CTCF-202ENST00000401394 SPRP35270 261 aaPredicted RBP21.33■■□□□ 1.01
CTCF-202ENST00000401394 NR2C2P49116 596 aa21.33■■□□□ 1.01
CTCF-202ENST00000401394 SERPINB8P50452 374 aa21.33■■□□□ 1.01
CTCF-202ENST00000401394 PRAMEP78395 509 aa21.33■■□□□ 1.01
CTCF-202ENST00000401394 MGAT5BQ3V5L5 792 aa21.33■■□□□ 1.01
CTCF-202ENST00000401394 GRTP1Q5TC63 336 aa21.33■■□□□ 1.01
CTCF-202ENST00000401394 PDCD6IPQ8WUM4 868 aaKnown RBP21.33■■□□□ 1.01
CTCF-202ENST00000401394 CENPIQ92674 756 aaPredicted RBP21.33■■□□□ 1.01
CTCF-202ENST00000401394 NXNL1Q96CM4 212 aa21.33■■□□□ 1.01
CTCF-202ENST00000401394 C6orf203Q9P0P8 240 aaPredicted RBP21.33■■□□□ 1.01
CTCF-202ENST00000401394 USP10Q14694 798 aaKnown RBP21.33■■□□□ 1
CTCF-202ENST00000401394 CLEC14AQ86T13 490 aa21.33■■□□□ 1
CTCF-202ENST00000401394 FAM167AQ96KS9 214 aa21.33■■□□□ 1
CTCF-202ENST00000401394 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.33■■□□□ 1
CTCF-202ENST00000401394 XPR1Q9UBH6 696 aa21.33■■□□□ 1
CTCF-202ENST00000401394 SNX13Q9Y5W8 968 aa21.33■■□□□ 1
CTCF-202ENST00000401394 ACOT8O14734 319 aa21.32■■□□□ 1
CTCF-202ENST00000401394 DLX3O60479 287 aa21.32■■□□□ 1
CTCF-202ENST00000401394 TSPAN1O60635 241 aa21.32■■□□□ 1
CTCF-202ENST00000401394 CLIC3O95833 236 aa21.32■■□□□ 1
CTCF-202ENST00000401394 FAM58BPP0C7Q3 252 aa21.32■■□□□ 1
CTCF-202ENST00000401394 DGKDQ16760 1214 aa21.32■■□□□ 1
CTCF-202ENST00000401394 CCDC153Q494R4 210 aa21.32■■□□□ 1
CTCF-202ENST00000401394 PIGZQ86VD9 579 aa21.32■■□□□ 1
CTCF-202ENST00000401394 NUP93Q8N1F7 819 aa21.32■■□□□ 1
CTCF-202ENST00000401394 HMGCLL1Q8TB92 370 aa21.32■■□□□ 1
CTCF-202ENST00000401394 C12orf42Q96LP6 360 aa21.32■■□□□ 1
CTCF-202ENST00000401394 PRMT7Q9NVM4 692 aaPredicted RBP21.32■■□□□ 1
CTCF-202ENST00000401394 PTTG2Q9NZH5 202 aa21.32■■□□□ 1
CTCF-202ENST00000401394 CCDC167Q9P0B6 97 aa21.32■■□□□ 1
CTCF-202ENST00000401394 CEPT1Q9Y6K0 416 aa21.32■■□□□ 1
CTCF-202ENST00000401394 TFPTP0C1Z6 253 aa21.32■■□□□ 1
CTCF-202ENST00000401394 ZNF26P17031 533 aaPredicted RBP21.32■■□□□ 1
CTCF-202ENST00000401394 CBLBQ13191 982 aa21.32■■□□□ 1
CTCF-202ENST00000401394 MOB2Q70IA6 237 aa21.32■■□□□ 1
CTCF-202ENST00000401394 ZNF410Q86VK4 478 aa21.32■■□□□ 1
CTCF-202ENST00000401394 LRCH3Q96II8 777 aa21.32■■□□□ 1
CTCF-202ENST00000401394 VRTNQ9H8Y1 702 aa21.32■■□□□ 1
CTCF-202ENST00000401394 EPS15L1Q9UBC2 864 aa21.32■■□□□ 1
CTCF-202ENST00000401394 FAM149AA5PLN7 773 aa21.31■■□□□ 1
CTCF-202ENST00000401394 AP1G1O43747 822 aa21.31■■□□□ 1
CTCF-202ENST00000401394 GNAO1P09471 354 aa21.31■■□□□ 1
CTCF-202ENST00000401394 MCF2P10911 925 aa21.31■■□□□ 1
CTCF-202ENST00000401394 NFKB1P19838 968 aa21.31■■□□□ 1
CTCF-202ENST00000401394 ME2P23368 584 aa21.31■■□□□ 1
CTCF-202ENST00000401394 GARSP41250 739 aaKnown RBP21.31■■□□□ 1
CTCF-202ENST00000401394 TSTD2Q5T7W7 516 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms