RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 ZC3H4Q9UPT8 1303 aaKnown RBP10.34□□□□□ -0.75
PTCH1-204ENST00000375290 FSCN1Q16658 493 aaKnown RBP10.34□□□□□ -0.75
PTCH1-204ENST00000375290 CYP1B1Q16678 543 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 FOXR1Q6PIV2 292 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 DENND5BQ6ZUT9 1274 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 ZNF410Q86VK4 478 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 COLGALT2Q8IYK4 626 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 NKD2Q969F2 451 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-204ENST00000375290 PLEKHG4BQ96PX9 1271 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 MIEF1Q9NQG6 463 aa10.34□□□□□ -0.75
PTCH1-204ENST00000375290 NPTX2P47972 431 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 NEDD8Q15843 81 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 SLC38A2Q96QD8 506 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 RACGAP1Q9H0H5 632 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 DPP3Q9NY33 737 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 LRRC42Q9Y546 428 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 DGKIO75912 1065 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 KDELR1P24390 212 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 STX4Q12846 297 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 SLC44A5Q8NCS7 719 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 MCCC1Q96RQ3 725 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-204ENST00000375290 SERPINA1P01009 418 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 RCVRNP35243 200 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 PLET1Q6UQ28 207 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 SLC30A8Q8IWU4 369 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 CHCHD4Q8N4Q1 142 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 TRPV1Q8NER1 839 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 CLPTM1LQ96KA5 538 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 RDH12Q96NR8 316 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 FAM53CQ9NYF3 392 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 TLL2Q9Y6L7 1015 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 ATMINO43313 823 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-204ENST00000375290 HMBSP08397 361 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 CASP4P49662 377 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 YWHAZP63104 245 aaKnown RBP10.33□□□□□ -0.76
PTCH1-204ENST00000375290 DMPKQ09013 629 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 CENPNQ96H22 339 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-204ENST00000375290 H6PDO95479 791 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 FGFR2P21802 821 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 PSMA1P25786 263 aaKnown RBP10.33□□□□□ -0.76
PTCH1-204ENST00000375290 ERP29P30040 261 aaKnown RBP10.33□□□□□ -0.76
PTCH1-204ENST00000375290 NR6A1Q15406 480 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 R3HCC1LQ7Z5L2 792 aaKnown RBP10.33□□□□□ -0.76
PTCH1-204ENST00000375290 TTC7BQ86TV6 843 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 HSFY1Q96LI6 401 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 MMP19Q99542 508 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 MRIQ9BWK5 157 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 KCNMB3Q9NPA1 279 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 MYH8P13535 1937 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 DYRK3O43781 588 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 ST8SIA6P61647 398 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 GTF2BQ00403 316 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 ADAMTSL2Q86TH1 951 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 CELF1Q92879 486 aaKnown RBP10.33□□□□□ -0.76
PTCH1-204ENST00000375290 TUBA1CQ9BQE3 449 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 MTG1Q9BT17 334 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-204ENST00000375290 EHD3Q9NZN3 535 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 PFDN2Q9UHV9 154 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 MKLN1Q9UL63 735 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 PPP2R3BQ9Y5P8 575 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 HNMTP50135 292 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 ELAVL2Q12926 359 aaKnown RBP10.33□□□□□ -0.76
PTCH1-204ENST00000375290 PPP1R36Q96LQ0 422 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 APOL2Q9BQE5 337 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 SPATA2Q9UM82 520 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.33□□□□□ -0.76
PTCH1-204ENST00000375290 TCRBV5S4A2TA0A5A2 114 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 H7C4K7 107 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 ZNF682O95780 498 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 SLC12A3P55017 1021 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 SCRN3Q0VDG4 424 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 TWF1Q12792 350 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 MAMLD1Q13495 774 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 CXXC5Q7LFL8 322 aaKnown RBP10.33□□□□□ -0.76
PTCH1-204ENST00000375290 LENG9Q96B70 501 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 HDHD2Q9H0R4 259 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 CDH22Q9UJ99 828 aa10.33□□□□□ -0.76
PTCH1-204ENST00000375290 MYL3P08590 195 aa10.32□□□□□ -0.76
PTCH1-204ENST00000375290 NR2F6P10588 404 aa10.32□□□□□ -0.76
PTCH1-204ENST00000375290 ALOX12P18054 663 aa10.32□□□□□ -0.76
PTCH1-204ENST00000375290 RPS6P62753 249 aaKnown RBP10.32□□□□□ -0.76
PTCH1-204ENST00000375290 HTATIP2Q9BUP3 242 aa10.32□□□□□ -0.76
PTCH1-204ENST00000375290 LHX5Q9H2C1 402 aa10.32□□□□□ -0.76
PTCH1-204ENST00000375290 POLR1BQ9H9Y6 1135 aa10.32□□□□□ -0.76
PTCH1-204ENST00000375290 GPN1Q9HCN4 374 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-204ENST00000375290 CLIC5Q9NZA1 410 aa10.32□□□□□ -0.76
PTCH1-204ENST00000375290 HOXA2O43364 376 aa10.32□□□□□ -0.76
PTCH1-204ENST00000375290 HS6ST1O60243 411 aa10.32□□□□□ -0.76
PTCH1-204ENST00000375290 TPST1O60507 370 aa10.32□□□□□ -0.76
PTCH1-204ENST00000375290 SDC2P34741 201 aa10.32□□□□□ -0.76
PTCH1-204ENST00000375290 MARC1Q5VT66 337 aa10.32□□□□□ -0.76
PTCH1-204ENST00000375290 TMEM86AQ8N2M4 240 aa10.32□□□□□ -0.76
PTCH1-204ENST00000375290 ETNK2Q9NVF9 386 aa10.32□□□□□ -0.76
PTCH1-204ENST00000375290 SSR3Q9UNL2 185 aa10.32□□□□□ -0.76
PTCH1-204ENST00000375290 AFDNP55196 1824 aaKnown RBP10.32□□□□□ -0.76
PTCH1-204ENST00000375290 A0A088AWK7 358 aa10.32□□□□□ -0.76
PTCH1-204ENST00000375290 METTL21EPA6NDL7 271 aa10.32□□□□□ -0.76
PTCH1-204ENST00000375290 MTRF1O75570 445 aaKnown RBP10.32□□□□□ -0.76
PTCH1-204ENST00000375290 ZNF10P21506 573 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-204ENST00000375290 PSEN1P49768 467 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms