RNA–Protein interactions for RNA: ENST00000270570.8

SLC47A1-201, Transcript of solute carrier family 47 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC47A1, Length 3,280 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1-201ENST00000270570 PREBQ9HCU5 417 aa13.39□□□□□ -0.27
SLC47A1-201ENST00000270570 GIMAP2Q9UG22 337 aa13.39□□□□□ -0.27
SLC47A1-201ENST00000270570 MTF2Q9Y483 593 aaPredicted RBP13.39□□□□□ -0.27
SLC47A1-201ENST00000270570 SNX13Q9Y5W8 968 aa13.39□□□□□ -0.27
SLC47A1-201ENST00000270570 KCNU1A8MYU2 1149 aa13.39□□□□□ -0.27
SLC47A1-201ENST00000270570 CLPTM1O96005 669 aa13.39□□□□□ -0.27
SLC47A1-201ENST00000270570 TFEBP19484 476 aa13.39□□□□□ -0.27
SLC47A1-201ENST00000270570 PTPN3P26045 913 aa13.39□□□□□ -0.27
SLC47A1-201ENST00000270570 FDFT1P37268 417 aa13.39□□□□□ -0.27
SLC47A1-201ENST00000270570 ARHGAP1Q07960 439 aa13.39□□□□□ -0.27
SLC47A1-201ENST00000270570 NIPAL4Q0D2K0 466 aa13.39□□□□□ -0.27
SLC47A1-201ENST00000270570 CYLC2Q14093 348 aaPredicted RBP13.39□□□□□ -0.27
SLC47A1-201ENST00000270570 SLC5A9Q2M3M2 681 aa13.39□□□□□ -0.27
SLC47A1-201ENST00000270570 BNC2Q6ZN30 1099 aaPredicted RBP13.39□□□□□ -0.27
SLC47A1-201ENST00000270570 SLC26A9Q7LBE3 791 aa13.39□□□□□ -0.27
SLC47A1-201ENST00000270570 GPRIN1Q7Z2K8 1008 aa13.39□□□□□ -0.27
SLC47A1-201ENST00000270570 KYQ8NBH2 561 aa13.39□□□□□ -0.27
SLC47A1-201ENST00000270570 B3GALNT2Q8NCR0 500 aa13.39□□□□□ -0.27
SLC47A1-201ENST00000270570 OR9I1Q8NGQ6 314 aa13.39□□□□□ -0.27
SLC47A1-201ENST00000270570 ATP6V1E2Q96A05 226 aa13.39□□□□□ -0.27
SLC47A1-201ENST00000270570 PLEKHA5Q9HAU0 1116 aa13.39□□□□□ -0.27
SLC47A1-201ENST00000270570 POLR2AP24928 1970 aaKnown RBP13.39□□□□□ -0.27
SLC47A1-201ENST00000270570 CASTOR2A6NHX0 329 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 CRABP2P29373 138 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 MAPK10P53779 464 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 OSTM1Q86WC4 334 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 TMEM40Q8WWA1 233 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 CDCA5Q96FF9 252 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 RBBP8Q99708 897 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 CAAP1Q9H8G2 361 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 WDR41Q9HAD4 459 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 CHCHD3Q9NX63 227 aaKnown RBP13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 AURKCQ9UQB9 309 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 AP4B1Q9Y6B7 739 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 TTC3P53804 2025 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 SMIM28A0A1B0GU29 152 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 I6L893 689 aaPredicted RBP13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 CYP2C9P11712 490 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 YBX3P16989 372 aaKnown RBP eCLIP13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 NR2C2P49116 596 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 MAXP61244 160 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 PPP1R3AQ16821 1122 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 ESRP1Q6NXG1 681 aaKnown RBP13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 ACAD11Q709F0 780 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 PQLC1Q8N2U9 271 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 OR6J1Q8NGC5 347 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 HIC2Q96JB3 615 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 TKTL2Q9H0I9 626 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 MORF4L1Q9UBU8 362 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 FZD10Q9ULW2 581 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 STAP1Q9ULZ2 295 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 MGAMO43451 1857 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 HNRNPRO43390 633 aaKnown RBP13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 GPC4O75487 556 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 TPP2P29144 1249 aaPredicted RBP13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 MAGEA3P43357 314 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 CDH13P55290 713 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 SNX16P57768 344 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 PRPSAP1Q14558 356 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 R3HDM1Q15032 1099 aaKnown RBP13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 TMCO4Q5TGY1 634 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 FSTL5Q8N475 847 aaPredicted RBP13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 GRIN3AQ8TCU5 1115 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 KBTBD7Q8WVZ9 684 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 RTP4Q96DX8 246 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 CPNE1Q99829 537 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 TRPC7Q9HCX4 862 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 LZTS1Q9Y250 596 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 ARID2Q68CP9 1835 aa13.38□□□□□ -0.27
SLC47A1-201ENST00000270570 PHIPQ8WWQ0 1821 aa13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 MYBPHLA2RUH7 354 aa13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 MT-ND1P03886 318 aa13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 PTPN1P18031 435 aaKnown RBP13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 HOXA11P31270 313 aaPredicted RBP13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 BEX3Q00994 111 aa13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 PLIN5Q00G26 463 aa13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 PDAP1Q13442 181 aaKnown RBP13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 ZNF470Q6ECI4 717 aa13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 CLEC6AQ6EIG7 209 aa13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 MYO1HQ8N1T3 1032 aa13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 OR6P1Q8NGX9 317 aa13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 PKP2Q99959 881 aa13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 MRPL1Q9BYD6 325 aaKnown RBP13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 SPON1Q9HCB6 807 aa13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 GALNT8Q9NY28 637 aa13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 SHROOM3Q8TF72 1996 aa13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 SF3B1O75533 1304 aaKnown RBP eCLIP13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 FAM149AA5PLN7 773 aa13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 MSI1O43347 362 aaKnown RBP13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 EPHX2P34913 555 aa13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 CHN2P52757 468 aa13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 CEACAM7Q14002 265 aa13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 SLC25A52Q3SY17 297 aa13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 RARS2Q5T160 578 aaKnown RBP13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 LRRC8EQ6NSJ5 796 aa13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 TFAP2DQ7Z6R9 452 aa13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 PSTKQ8IV42 348 aaKnown RBP13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 ACTRT2Q8TDY3 377 aa13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 FICDQ9BVA6 458 aa13.37□□□□□ -0.27
SLC47A1-201ENST00000270570 DDX43Q9NXZ2 648 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms