RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 SLC8A1P32418 973 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 MAPKAPK2P49137 400 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 OGDHQ02218 1023 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 GNA12Q03113 381 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 SCAPQ12770 1279 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 ELAVL3Q14576 367 aaKnown RBP16.08■□□□□ 0.16
LINC00339-207ENST00000634712 CST6Q15828 149 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 FAM72AQ5TYM5 149 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 FAM72DQ6L9T8 149 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 RETSATQ6NUM9 610 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 FAM72BQ86X60 149 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 SH2D3CQ8N5H7 860 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 DCAF4L2Q8NA75 395 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 OR7D4Q8NG98 312 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 CEP192Q8TEP8 1941 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 OR8D1Q8WZ84 308 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 CCDC114Q96M63 670 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 PSMB7Q99436 277 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 EPAS1Q99814 870 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 RTKNQ9BST9 563 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 MAGEB5Q9BZ81 275 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 PABPC3Q9H361 631 aaKnown RBP16.08■□□□□ 0.16
LINC00339-207ENST00000634712 SGK2Q9HBY8 427 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 TMEM74BQ9NUR3 256 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 FBXL12Q9NXK8 326 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 DNAI1Q9UI46 699 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 VPS51Q9UID3 782 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 FZD10Q9ULW2 581 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 HPCAL4Q9UM19 191 aa16.08■□□□□ 0.16
LINC00339-207ENST00000634712 PATE3B3GLJ2 98 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 MID1O15344 667 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 RNASEH2AO75792 299 aaKnown RBP16.07■□□□□ 0.16
LINC00339-207ENST00000634712 ADH1BP00325 375 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 VAV1P15498 845 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 EPHB2P29323 1055 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 PSMD8P48556 350 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 IRX4P78413 519 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 SLC20A2Q08357 652 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 CCDC122Q5T0U0 273 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 MANEALQ5VSG8 457 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 DCAF12L1Q5VU92 463 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 USP30Q70CQ3 517 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 ZNF354CQ86Y25 554 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 PYROXD2Q8N2H3 581 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 OR8K1Q8NGG5 319 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 FNIP1Q8TF40 1166 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 FRS2Q8WU20 508 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 FAM129BQ96TA1 746 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 NCAPGQ9BPX3 1015 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 EDEM2Q9BV94 578 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 MIR1-1HGQ9H1L0 117 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 PCED1AQ9H1Q7 454 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 CATSPERBQ9H7T0 1116 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 TMEM248Q9NWD8 314 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 DLL3Q9NYJ7 618 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 SUSD2Q9UGT4 822 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 EVLQ9UI08 416 aaPredicted RBP16.07■□□□□ 0.16
LINC00339-207ENST00000634712 HS3ST2Q9Y278 367 aa16.07■□□□□ 0.16
LINC00339-207ENST00000634712 DOCK4Q8N1I0 1966 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 METTL12A8MUP2 240 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 PRPSAP2O60256 369 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 SEMA4FO95754 770 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 MT-CO1P00395 513 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 C7P10643 843 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 SRCP12931 536 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 C5AR1P21730 350 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 MAOBP27338 520 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 ACSL1P33121 698 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 RECQLP46063 649 aaPredicted RBP16.06■□□□□ 0.16
LINC00339-207ENST00000634712 CLCN6P51797 869 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 ATXN3P54252 364 aaPredicted RBP16.06■□□□□ 0.16
LINC00339-207ENST00000634712 GFPT1Q06210 699 aaPredicted RBP16.06■□□□□ 0.16
LINC00339-207ENST00000634712 ERMARDQ5T6L9 678 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 STPG1Q5TH74 334 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 FAM46CQ5VWP2 391 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 ALKBH5Q6P6C2 394 aaKnown RBP16.06■□□□□ 0.16
LINC00339-207ENST00000634712 SLC23A3Q6PIS1 610 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 LINGO4Q6UY18 593 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 Q6ZVU0 165 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 DGLUCYQ7Z3D6 616 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 VSTM4Q8IW00 320 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 HDDC3Q8N4P3 179 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 SNX19Q92543 992 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 MAGEH1Q9H213 219 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 DEF6Q9H4E7 631 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 RXFP3Q9NSD7 469 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 DONSONQ9NYP3 566 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 PCSK1NQ9UHG2 260 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 SLC6A14Q9UN76 642 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 DMXL1Q9Y485 3027 aa16.06■□□□□ 0.16
LINC00339-207ENST00000634712 CEP250Q9BV73 2442 aa16.05■□□□□ 0.16
LINC00339-207ENST00000634712 A0A087X0T9 212 aa16.05■□□□□ 0.16
LINC00339-207ENST00000634712 A0A1W2PP55 124 aa16.05■□□□□ 0.16
LINC00339-207ENST00000634712 FAM47DPA6NHR8 397 aa16.05■□□□□ 0.16
LINC00339-207ENST00000634712 C1QTNF3-AMACRE9PGA6 284 aa16.05■□□□□ 0.16
LINC00339-207ENST00000634712 SLC30A4O14863 429 aa16.05■□□□□ 0.16
LINC00339-207ENST00000634712 RAMP2O60895 175 aa16.05■□□□□ 0.16
LINC00339-207ENST00000634712 SERPINF2P08697 491 aa16.05■□□□□ 0.16
LINC00339-207ENST00000634712 FAM228BP0C875 321 aa16.05■□□□□ 0.16
LINC00339-207ENST00000634712 GLDCP23378 1020 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms