RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 OR7D4Q8NG98 312 aa17.15■□□□□ 0.34
UBE3D-208ENST00000626828 FRS2Q8WU20 508 aa17.15■□□□□ 0.34
UBE3D-208ENST00000626828 FOXJ1Q92949 421 aa17.15■□□□□ 0.34
UBE3D-208ENST00000626828 CCDC42Q96M95 316 aa17.15■□□□□ 0.34
UBE3D-208ENST00000626828 ANP32EQ9BTT0 268 aa17.15■□□□□ 0.34
UBE3D-208ENST00000626828 TRIM7Q9C029 511 aa17.15■□□□□ 0.34
UBE3D-208ENST00000626828 CATSPERBQ9H7T0 1116 aa17.15■□□□□ 0.34
UBE3D-208ENST00000626828 PCSK1NQ9UHG2 260 aa17.15■□□□□ 0.34
UBE3D-208ENST00000626828 VPS51Q9UID3 782 aa17.15■□□□□ 0.34
UBE3D-208ENST00000626828 HS3ST2Q9Y278 367 aa17.15■□□□□ 0.34
UBE3D-208ENST00000626828 NCKAP1Q9Y2A7 1128 aa17.15■□□□□ 0.34
UBE3D-208ENST00000626828 FRYLO94915 3013 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 CXorf51AA0A1B0GTR3 108 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 MYO1FO00160 1098 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 CBX4O00257 560 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 CREB3O43889 395 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 SNAP91O60641 907 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 MIPP30301 263 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 PCK1P35558 622 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 PTGER3P43115 390 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 CLCN6P51797 869 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 LMNB2Q03252 620 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 GFPT1Q06210 699 aaPredicted RBP17.14■□□□□ 0.33
UBE3D-208ENST00000626828 ZNF252P-AS1Q0IIN9 211 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 ELAVL3Q14576 367 aaKnown RBP17.14■□□□□ 0.33
UBE3D-208ENST00000626828 TTC31Q49AM3 519 aaPredicted RBP17.14■□□□□ 0.33
UBE3D-208ENST00000626828 BOLA3Q53S33 107 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 LYSMD4Q5XG99 296 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 IL31Q6EBC2 164 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 SYT12Q8IV01 421 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 STK40Q8N2I9 435 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 DEFB119Q8N690 84 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 ATP11CQ8NB49 1132 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 CADM4Q8NFZ8 388 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 PIGKQ92643 395 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 CHP1Q99653 195 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 NUP85Q9BW27 656 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 ACE2Q9BYF1 805 aaPredicted RBP17.14■□□□□ 0.33
UBE3D-208ENST00000626828 ATP13A1Q9HD20 1204 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 CD93Q9NPY3 652 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 IP6K2Q9UHH9 426 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 DNAI1Q9UI46 699 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 HPCAL4Q9UM19 191 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 NENFQ9UMX5 172 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 FARP1Q9Y4F1 1045 aaPredicted RBP17.14■□□□□ 0.33
UBE3D-208ENST00000626828 KNL1Q8NG31 2342 aa17.14■□□□□ 0.33
UBE3D-208ENST00000626828 CHD5Q8TDI0 1954 aa17.13■□□□□ 0.33
UBE3D-208ENST00000626828 MUC22E2RYF6 1773 aaPredicted RBP17.13■□□□□ 0.33
UBE3D-208ENST00000626828 WASH4PA8MWX3 477 aa17.13■□□□□ 0.33
UBE3D-208ENST00000626828 MT-CO1P00395 513 aa17.13■□□□□ 0.33
UBE3D-208ENST00000626828 H2AFZP0C0S5 128 aa17.13■□□□□ 0.33
UBE3D-208ENST00000626828 SRCP12931 536 aa17.13■□□□□ 0.33
UBE3D-208ENST00000626828 SDHBP21912 280 aa17.13■□□□□ 0.33
UBE3D-208ENST00000626828 SLC8A1P32418 973 aa17.13■□□□□ 0.33
UBE3D-208ENST00000626828 ZNF135P52742 658 aaPredicted RBP17.13■□□□□ 0.33
UBE3D-208ENST00000626828 YBEYP58557 167 aaPredicted RBP17.13■□□□□ 0.33
UBE3D-208ENST00000626828 SEMA3BQ13214 749 aa17.13■□□□□ 0.33
UBE3D-208ENST00000626828 POLD3Q15054 466 aaPredicted RBP17.13■□□□□ 0.33
UBE3D-208ENST00000626828 CST6Q15828 149 aa17.13■□□□□ 0.33
UBE3D-208ENST00000626828 SYCP2LQ5T4T6 812 aa17.13■□□□□ 0.33
UBE3D-208ENST00000626828 PRR23CQ6ZRP0 262 aa17.13■□□□□ 0.33
UBE3D-208ENST00000626828 USP30Q70CQ3 517 aa17.13■□□□□ 0.33
UBE3D-208ENST00000626828 H2AFVQ71UI9 128 aa17.13■□□□□ 0.33
UBE3D-208ENST00000626828 DSG4Q86SJ6 1040 aa17.13■□□□□ 0.33
UBE3D-208ENST00000626828 GAS2L3Q86XJ1 694 aa17.13■□□□□ 0.33
UBE3D-208ENST00000626828 MMAAQ8IVH4 418 aaKnown RBP17.13■□□□□ 0.33
UBE3D-208ENST00000626828 RTL3Q8N8U3 475 aaKnown RBP17.13■□□□□ 0.33
UBE3D-208ENST00000626828 C12orf50Q8NA57 414 aaPredicted RBP17.13■□□□□ 0.33
UBE3D-208ENST00000626828 GANCQ8TET4 914 aa17.13■□□□□ 0.33
UBE3D-208ENST00000626828 CTNNBL1Q8WYA6 563 aaPredicted RBP17.13■□□□□ 0.33
UBE3D-208ENST00000626828 ARHGEF2Q92974 986 aaKnown RBP17.13■□□□□ 0.33
UBE3D-208ENST00000626828 GPR174Q9BXC1 333 aa17.13■□□□□ 0.33
UBE3D-208ENST00000626828 PCED1AQ9H1Q7 454 aa17.13■□□□□ 0.33
UBE3D-208ENST00000626828 PABPC3Q9H361 631 aaKnown RBP17.13■□□□□ 0.33
UBE3D-208ENST00000626828 DHX35Q9H5Z1 703 aaKnown RBP17.13■□□□□ 0.33
UBE3D-208ENST00000626828 NHEJ1Q9H9Q4 299 aaPredicted RBP17.13■□□□□ 0.33
UBE3D-208ENST00000626828 NDFIP2Q9NV92 336 aa17.13■□□□□ 0.33
UBE3D-208ENST00000626828 AP4E1Q9UPM8 1137 aa17.13■□□□□ 0.33
UBE3D-208ENST00000626828 MCF2LO15068 1137 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 FGF10O15520 208 aaPredicted RBP17.12■□□□□ 0.33
UBE3D-208ENST00000626828 RAMP2O60895 175 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 LRCH4O75427 683 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 ZMPSTE24O75844 475 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 ADH1BP00325 375 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 C5AR1P21730 350 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 HOXD12P35452 270 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 HCAR3P49019 387 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 ZNF75DP51815 510 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 CCDC6Q16204 474 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 WDR45BQ5MNZ6 344 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 FAM46CQ5VWP2 391 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 ARMCX6Q7L4S7 300 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 FAM124AQ86V42 546 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 CACUL1Q86Y37 369 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 NIPA2Q8N8Q9 360 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 OR8D1Q8WZ84 308 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 MRFAP1L1Q96HT8 127 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 CCDC114Q96M63 670 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 SNRNP25Q9BV90 132 aaKnown RBP17.12■□□□□ 0.33
UBE3D-208ENST00000626828 BTBD1Q9H0C5 482 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms