RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 C10orf88Q9H8K7 445 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 FBXL12Q9NXK8 326 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 SYNDIG1LA6NDD5 238 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 HSPA4LO95757 839 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 RBL1P28749 1068 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 CUL1Q13616 776 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 RUNX3Q13761 415 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 LRRC73Q5JTD7 316 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 CRTC3Q6UUV7 619 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 C4orf22Q6V702 233 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 TAS1R1Q7RTX1 841 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 PHF13Q86YI8 300 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-229ENST00000622668 SGF29Q96ES7 293 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 HEPHQ9BQS7 1158 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 TRAIPQ9BWF2 469 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 CAPN10Q9HC96 672 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 CAPN6Q9Y6Q1 641 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 SSC5DA1L4H1 1573 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 TULP2O00295 520 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 MYO1DO94832 1006 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 ZNF7P17097 686 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-229ENST00000622668 KDELR1P24390 212 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 HMOX2P30519 316 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 CDH4P55283 916 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 HSPA14Q0VDF9 509 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 ZKSCAN8Q15776 578 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-229ENST00000622668 RBBP7Q16576 425 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 SGO1Q5FBB7 561 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 VSIG1Q86XK7 387 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 JAMLQ86YT9 394 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 IFNLR1Q8IU57 520 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-229ENST00000622668 GJD3Q8N144 294 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 GLMNQ92990 594 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 CYTH2Q99418 400 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 NELL2Q99435 816 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 BRD8Q9H0E9 1235 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 GANQ9H2C0 597 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 LMAN1LQ9HAT1 526 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 TRHDEQ9UKU6 1024 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 CHKBQ9Y259 395 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 KANSL1LA0AUZ9 987 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 SUPT3HB4E1H0 165 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 SUPT3HO75486 399 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 RHOQP17081 205 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 ARRB1P49407 418 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-229ENST00000622668 ECT2LQ008S8 904 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 ELP6Q0PNE2 266 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 CDH17Q12864 832 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 CCDC142Q17RM4 750 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 RBM43Q6ZSC3 357 aaKnown RBP9.25□□□□□ -0.93
HDAC9-229ENST00000622668 SRRM1Q8IYB3 904 aaKnown RBP9.25□□□□□ -0.93
HDAC9-229ENST00000622668 LGMNQ99538 433 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 SMOQ99835 787 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 OSBPL2Q9H1P3 480 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 WWOXQ9NZC7 414 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 SLC13A4Q9UKG4 626 aa9.25□□□□□ -0.93
HDAC9-229ENST00000622668 PAPPAQ13219 1627 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 USP27XA6NNY8 438 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 RNF40O75150 1001 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 ASLP04424 464 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 APOA4P06727 396 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 CSKP41240 450 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 NR2C2P49116 596 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 FBXW4P57775 412 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 YBEYP58557 167 aaPredicted RBP9.24□□□□□ -0.93
HDAC9-229ENST00000622668 ILF3Q12906 894 aaKnown RBP eCLIP9.24□□□□□ -0.93
HDAC9-229ENST00000622668 PON2Q15165 354 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 CCDC38Q502W7 563 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 SPDYAQ5MJ70 313 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 SYPL2Q5VXT5 272 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 UGT3A1Q6NUS8 523 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 TTC9BQ8N6N2 239 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 AGR3Q8TD06 166 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 WDR24Q96S15 920 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 ABCG8Q9H221 673 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 LRRC40Q9H9A6 602 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 COG4Q9H9E3 785 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 CLIC5Q9NZA1 410 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 STARD13Q9Y3M8 1113 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 ANKRD36CQ5JPF3 1778 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 SMCHD1A6NHR9 2005 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 GOLGA8RI6L899 631 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 KAT7O95251 611 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 ALPPL2P10696 532 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 ALADP13716 330 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 PTPN3P26045 913 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 SPRP35270 261 aaPredicted RBP9.24□□□□□ -0.93
HDAC9-229ENST00000622668 MAGEA11P43364 429 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 SEMG2Q02383 582 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 PHKG1Q16816 387 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 TTC39BQ5VTQ0 682 aaPredicted RBP9.24□□□□□ -0.93
HDAC9-229ENST00000622668 OR10G6Q8NH81 332 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 CRYGNQ8WXF5 182 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 LRCH3Q96II8 777 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 KLHL32Q96NJ5 620 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 VAT1Q99536 393 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 TMPRSS4Q9NRS4 437 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 CYP8B1Q9UNU6 501 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 NAV1Q8NEY1 1877 aa9.24□□□□□ -0.93
HDAC9-229ENST00000622668 CPED1A4D0V7 1026 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms