RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 LPPQ93052 612 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 C12orf42Q96LP6 360 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 PLEKHA5Q9HAU0 1116 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 MOCS1Q9NZB8 636 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 SLC2A6Q9UGQ3 507 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 ZDHHC2Q9UIJ5 367 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 PPME1Q9Y570 386 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 ASB3Q9Y575 518 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 CASTOR2A6NHX0 329 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 KCNU1A8MYU2 1149 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 AURKAO14965 403 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 MDM4O15151 490 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 TRIM13O60858 407 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 FKBP6O75344 327 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 UQCRBP14927 111 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 AOC1P19801 751 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 SERPINB8P50452 374 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 CDK7P50613 346 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 SLC12A2P55011 1212 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 TMED1Q13445 227 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 TLR1Q15399 786 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 FSCBQ5H9T9 825 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 GPRIN1Q7Z2K8 1008 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 OSTM1Q86WC4 334 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 NT5DC4Q86YG4 428 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 DSELQ8IZU8 1212 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 OR6J1Q8NGC5 347 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 B4GALNT2Q8NHY0 566 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 EME1Q96AY2 570 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 OPTNQ96CV9 577 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 RPL10LQ96L21 214 aaKnown RBP9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 CAMKK2Q96RR4 588 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 SPATA16Q9BXB7 569 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 SLC4A5Q9BY07 1137 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 ILKAPQ9H0C8 392 aaPredicted RBP9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 CAAP1Q9H8G2 361 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 PNPLA8Q9NP80 782 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 CPA4Q9UI42 421 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 CDY2AQ9Y6F7 541 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 CDY1Q9Y6F8 540 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 SF3B1O75533 1304 aaKnown RBP eCLIP9.13□□□□□ -0.953e-7■■■■■ 37.9
HDGFL3-206ENST00000568294 IGKV6-21A0A0C4DH24 114 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 F8W8V4 182 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 HNRNPRO43390 633 aaKnown RBP9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 GSTA2P09210 222 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 ZFXP17010 805 aaPredicted RBP9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 TPSB2P20231 275 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 PTPN3P26045 913 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 FDFT1P37268 417 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 INHBEP58166 350 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 PLIN5Q00G26 463 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 ENPEPQ07075 957 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 CYLC2Q14093 348 aaPredicted RBP9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 PRPSAP1Q14558 356 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 TPSAB1Q15661 275 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 ANKRD20A4Q4UJ75 823 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 C9orf57Q5W0N0 161 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 LRRC8BQ6P9F7 803 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 BNC2Q6ZN30 1099 aaPredicted RBP9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 ACAD11Q709F0 780 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 PLPPR4Q7Z2D5 763 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 TMEM110Q86TL2 294 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 OR9I1Q8NGQ6 314 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 CXorf38Q8TB03 319 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 RNF217Q8TC41 542 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 ATP6V1E2Q96A05 226 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 NXNL1Q96CM4 212 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 CDCA5Q96FF9 252 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 GCOM2Q9BZD3 368 aaPredicted RBP9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 AURKCQ9UQB9 309 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 SNX13Q9Y5W8 968 aa9.13□□□□□ -0.95
HDGFL3-206ENST00000568294 COL11A1P12107 1806 aaPredicted RBP9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 BIRC5O15392 142 aa9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 MSI1O43347 362 aaKnown RBP9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 MT-ND1P03886 318 aa9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 PRKCGP05129 697 aa9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 CYP2C9P11712 490 aa9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 TSHRP16473 764 aa9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 RPS12P25398 132 aaKnown RBP9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 MAXP61244 160 aa9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 MS4A2Q01362 244 aa9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 NIPAL4Q0D2K0 466 aa9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 PDAP1Q13442 181 aaKnown RBP9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 PPP1R3AQ16821 1122 aa9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 LRRC8EQ6NSJ5 796 aa9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 LRRC39Q96DD0 335 aa9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 FICDQ9BVA6 458 aa9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 LRRC40Q9H9A6 602 aa9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 WDR41Q9HAD4 459 aa9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 PRDM16Q9HAZ2 1276 aa9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 SPON1Q9HCB6 807 aa9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 ETAA1Q9NY74 926 aa9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 GPRC5DQ9NZD1 345 aa9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 AP4B1Q9Y6B7 739 aa9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 FAM149AA5PLN7 773 aa9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 PTPN1P18031 435 aaKnown RBP9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 MATKP42679 507 aa9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 BEX3Q00994 111 aa9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 ARHGAP1Q07960 439 aa9.12□□□□□ -0.95
HDGFL3-206ENST00000568294 INCA1Q0VD86 236 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms