RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 DNAAF5Q86Y56 855 aa16.11■□□□□ 0.17
CCDC78-216ENST00000544996 STK40Q8N2I9 435 aa16.11■□□□□ 0.17
CCDC78-216ENST00000544996 SH2D3CQ8N5H7 860 aa16.11■□□□□ 0.17
CCDC78-216ENST00000544996 OR8K1Q8NGG5 319 aa16.11■□□□□ 0.17
CCDC78-216ENST00000544996 FNIP1Q8TF40 1166 aa16.11■□□□□ 0.17
CCDC78-216ENST00000544996 FRS2Q8WU20 508 aa16.11■□□□□ 0.17
CCDC78-216ENST00000544996 OR8D1Q8WZ84 308 aa16.11■□□□□ 0.17
CCDC78-216ENST00000544996 CCDC114Q96M63 670 aa16.11■□□□□ 0.17
CCDC78-216ENST00000544996 FAM129BQ96TA1 746 aa16.11■□□□□ 0.17
CCDC78-216ENST00000544996 PSMB7Q99436 277 aa16.11■□□□□ 0.17
CCDC78-216ENST00000544996 OMDQ99983 421 aa16.11■□□□□ 0.17
CCDC78-216ENST00000544996 NCAPGQ9BPX3 1015 aa16.11■□□□□ 0.17
CCDC78-216ENST00000544996 RTKNQ9BST9 563 aa16.11■□□□□ 0.17
CCDC78-216ENST00000544996 SGK2Q9HBY8 427 aa16.11■□□□□ 0.17
CCDC78-216ENST00000544996 ATP13A1Q9HD20 1204 aa16.11■□□□□ 0.17
CCDC78-216ENST00000544996 ZNHIT6Q9NWK9 470 aaKnown RBP16.11■□□□□ 0.17
CCDC78-216ENST00000544996 FBXL12Q9NXK8 326 aa16.11■□□□□ 0.17
CCDC78-216ENST00000544996 ZNF212Q9UDV6 495 aa16.11■□□□□ 0.17
CCDC78-216ENST00000544996 SUSD2Q9UGT4 822 aa16.11■□□□□ 0.17
CCDC78-216ENST00000544996 FZD10Q9ULW2 581 aa16.11■□□□□ 0.17
CCDC78-216ENST00000544996 FARP1Q9Y4F1 1045 aaPredicted RBP16.11■□□□□ 0.17
CCDC78-216ENST00000544996 ATXN2Q99700 1313 aaKnown RBP16.11■□□□□ 0.17
CCDC78-216ENST00000544996 WDR87Q6ZQQ6 2873 aa16.11■□□□□ 0.17
CCDC78-216ENST00000544996 METTL12A8MUP2 240 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 PATE3B3GLJ2 98 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 SLC30A4O14863 429 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 CREB3O43889 395 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 RNASEH2AO75792 299 aaKnown RBP16.1■□□□□ 0.17
CCDC78-216ENST00000544996 SEMA4FO95754 770 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 ADH1BP00325 375 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 IL1BP01584 269 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 CFIP05156 583 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 SRCP12931 536 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 VAV1P15498 845 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 C5AR1P21730 350 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 EPHB2P29323 1055 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 HNRNPH3P31942 346 aaKnown RBP16.1■□□□□ 0.17
CCDC78-216ENST00000544996 SLC8A1P32418 973 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 PSMD8P48556 350 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 LIMK1P53667 647 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 IRX4P78413 519 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 SLC20A2Q08357 652 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 ARTNQ5T4W7 220 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 FAM46CQ5VWP2 391 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 PEAR1Q5VY43 1037 aaPredicted RBP16.1■□□□□ 0.17
CCDC78-216ENST00000544996 SLC23A3Q6PIS1 610 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 NLRP14Q86W24 1093 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 VSTM4Q8IW00 320 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 OR7D4Q8NG98 312 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 MAGEB5Q9BZ81 275 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 TMEM248Q9NWD8 314 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 DONSONQ9NYP3 566 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 DNAI1Q9UI46 699 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 HPCAL4Q9UM19 191 aa16.1■□□□□ 0.17
CCDC78-216ENST00000544996 CKAP5Q14008 2032 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 ABCA7Q8IZY2 2146 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 SPAG17Q6Q759 2223 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 A0A087X0T9 212 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 LNP1A1A4G5 178 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 EIF3CLB5ME19 914 aaKnown RBP16.09■□□□□ 0.17
CCDC78-216ENST00000544996 MCF2LO15068 1137 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 MID1O15344 667 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 PRPSAP2O60256 369 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 RAMP2O60895 175 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 MT-CO1P00395 513 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 FAM228BP0C875 321 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 ACSL1P33121 698 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 GEMIN4P57678 1058 aaKnown RBP16.09■□□□□ 0.17
CCDC78-216ENST00000544996 GFPT1Q06210 699 aaPredicted RBP16.09■□□□□ 0.17
CCDC78-216ENST00000544996 CCDC122Q5T0U0 273 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 STPG1Q5TH74 334 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 DCAF12L1Q5VU92 463 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 ALKBH5Q6P6C2 394 aaKnown RBP16.09■□□□□ 0.17
CCDC78-216ENST00000544996 LINGO4Q6UY18 593 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 Q6ZVU0 165 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 PYROXD2Q8N2H3 581 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 EIF3CQ99613 913 aaKnown RBP16.09■□□□□ 0.17
CCDC78-216ENST00000544996 EDEM2Q9BV94 578 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 MAGEH1Q9H213 219 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 CATSPERBQ9H7T0 1116 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 RXFP3Q9NSD7 469 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 ARHGAP20Q9P2F6 1191 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 FZD4Q9ULV1 537 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 SLC6A14Q9UN76 642 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 PLXND1Q9Y4D7 1925 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 SDK1Q7Z5N4 2213 aa16.09■□□□□ 0.17
CCDC78-216ENST00000544996 THADAQ6YHU6 1953 aa16.08■□□□□ 0.16
CCDC78-216ENST00000544996 CXorf51AA0A1B0GTR3 108 aa16.08■□□□□ 0.16
CCDC78-216ENST00000544996 A0A1W2PP55 124 aa16.08■□□□□ 0.16
CCDC78-216ENST00000544996 C1QTNF3-AMACRE9PGA6 284 aa16.08■□□□□ 0.16
CCDC78-216ENST00000544996 ALOX15BO15296 676 aa16.08■□□□□ 0.16
CCDC78-216ENST00000544996 FGF10O15520 208 aaPredicted RBP16.08■□□□□ 0.16
CCDC78-216ENST00000544996 BNIP3LO60238 219 aa16.08■□□□□ 0.16
CCDC78-216ENST00000544996 SERPINF2P08697 491 aa16.08■□□□□ 0.16
CCDC78-216ENST00000544996 GOT1P17174 413 aa16.08■□□□□ 0.16
CCDC78-216ENST00000544996 MAOBP27338 520 aa16.08■□□□□ 0.16
CCDC78-216ENST00000544996 HTR7P34969 479 aa16.08■□□□□ 0.16
CCDC78-216ENST00000544996 RECQLP46063 649 aaPredicted RBP16.08■□□□□ 0.16
CCDC78-216ENST00000544996 ACAP1Q15027 740 aa16.08■□□□□ 0.16
CCDC78-216ENST00000544996 POLD3Q15054 466 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms