RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 ZDHHC4Q9NPG8 344 aa6.8□□□□□ -1.32
CDCA3-209ENST00000544610 HOMER3Q9NSC5 361 aa6.8□□□□□ -1.32
CDCA3-209ENST00000544610 ABCC13Q9NSE7 274 aa6.8□□□□□ -1.32
CDCA3-209ENST00000544610 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.8□□□□□ -1.32
CDCA3-209ENST00000544610 CALCOCO1Q9P1Z2 691 aa6.8□□□□□ -1.32
CDCA3-209ENST00000544610 RCOR3Q9P2K3 495 aaPredicted RBP6.8□□□□□ -1.32
CDCA3-209ENST00000544610 TRIM10Q9UDY6 481 aa6.8□□□□□ -1.32
CDCA3-209ENST00000544610 ZNF638Q14966 1978 aaKnown RBP6.8□□□□□ -1.32
CDCA3-209ENST00000544610 PLXND1Q9Y4D7 1925 aa6.8□□□□□ -1.32
CDCA3-209ENST00000544610 DMXL2Q8TDJ6 3036 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 A0A1W2PQF6 199 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 FAM221BA6H8Z2 402 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 TBC1D3BA6NDS4 549 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 CLDN5O00501 218 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 BUB1O43683 1085 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 SPOPO43791 374 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 HYAL3O43820 417 aaPredicted RBP6.79□□□□□ -1.32
CDCA3-209ENST00000544610 TULP3O75386 442 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 BEST1O76090 585 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 IGLV3-25P01717 112 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 LTFP02788 710 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 SERPINF2P08697 491 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 CCNYL3P0C7X3 344 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 PDGFRAP16234 1089 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 GABRG2P18507 467 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 GPD1P21695 349 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 COMTP21964 271 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 PAFAH1B1P43034 410 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 PEX5P50542 639 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 SLC5A3P53794 718 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 RPL7AP62424 266 aaKnown RBP6.79□□□□□ -1.32
CDCA3-209ENST00000544610 SIM1P81133 766 aaPredicted RBP6.79□□□□□ -1.32
CDCA3-209ENST00000544610 RPL6Q02878 288 aaKnown RBP6.79□□□□□ -1.32
CDCA3-209ENST00000544610 RING1Q06587 406 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 ADIGQ0VDE8 80 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 SCAPQ12770 1279 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 IFRD2Q12894 506 aaPredicted RBP6.79□□□□□ -1.32
CDCA3-209ENST00000544610 ORC1Q13415 861 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 PDK2Q15119 407 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 DUOXA1Q1HG43 343 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 PREPLQ4J6C6 727 aaPredicted RBP6.79□□□□□ -1.32
CDCA3-209ENST00000544610 BRMS1LQ5PSV4 323 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 DNTTIP2Q5QJE6 756 aaKnown RBP6.79□□□□□ -1.32
CDCA3-209ENST00000544610 HECTD3Q5T447 861 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 BTBD8Q5XKL5 378 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 OR6B2Q6IFH4 312 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 SLC36A4Q6YBV0 504 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 FAM183BPQ6ZVS7 135 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 RABEPKQ7Z6M1 372 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 MAP7D3Q8IWC1 876 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 BBS7Q8IWZ6 715 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 SCUBE3Q8IX30 993 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 RCOR2Q8IZ40 523 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 PGBD3Q8N328 593 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 C17orf53Q8N3J3 647 aaPredicted RBP6.79□□□□□ -1.32
CDCA3-209ENST00000544610 ZNF513Q8N8E2 541 aaPredicted RBP6.79□□□□□ -1.32
CDCA3-209ENST00000544610 CEP112Q8N8E3 955 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 CEP76Q8TAP6 659 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 ADAM32Q8TC27 787 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 FAM71BQ8TC56 605 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 ZCCHC14Q8WYQ9 949 aaKnown RBP6.79□□□□□ -1.32
CDCA3-209ENST00000544610 FBXO32Q969P5 355 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 NTAN1Q96AB6 310 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 RBM41Q96IZ5 413 aaKnown RBP6.79□□□□□ -1.32
CDCA3-209ENST00000544610 RUNDC3BQ96NL0 473 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 MCEEQ96PE7 176 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 OSBPL9Q96SU4 736 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 KCNK16Q96T55 309 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 NPY6RQ99463 290 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 CCSER2Q9H7U1 834 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 CAPN10Q9HC96 672 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 CD248Q9HCU0 757 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 FSCN3Q9NQT6 498 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 TLR8Q9NR97 1041 aaKnown RBP6.79□□□□□ -1.32
CDCA3-209ENST00000544610 SPHK2Q9NRA0 654 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 DONSONQ9NYP3 566 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 DEC1Q9P2X7 70 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 EGFL7Q9UHF1 273 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 KLK13Q9UKR3 277 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 HCN2Q9UL51 889 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 SLC6A14Q9UN76 642 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 DOLKQ9UPQ8 538 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 MSRB2Q9Y3D2 182 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 SH3BP1Q9Y3L3 701 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 STARD13Q9Y3M8 1113 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 MRFAP1Q9Y605 127 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 SMG1Q96Q15 3661 aaKnown RBP6.79□□□□□ -1.32
CDCA3-209ENST00000544610 LOC400499M0QZD8 3231 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 AKAP13Q12802 2813 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 NUP205Q92621 2012 aa6.79□□□□□ -1.32
CDCA3-209ENST00000544610 PCDH15Q96QU1 1955 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 IGHV1OR15-9A0A0B4J2B8 117 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 A0A0U1RQJ8 604 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 SPAARA0A1B0GVQ0 90 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 H0Y626 953 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 CCDC188H7C350 402 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 TULP2O00295 520 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 TRIM24O15164 1050 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 CACNG3O60359 315 aa6.78□□□□□ -1.32
CDCA3-209ENST00000544610 GREM1O60565 184 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms