RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 UGT2B28Q9BY64 529 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 POMKQ9H5K3 350 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 DMGDHQ9UI17 866 aaKnown RBP17.07■□□□□ 0.32
SCARB1-205ENST00000538291 POLR1AO95602 1720 aaPredicted RBP17.07■□□□□ 0.32
SCARB1-205ENST00000538291 IRF6O14896 467 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 HMGB3O15347 200 aaKnown RBP17.07■□□□□ 0.32
SCARB1-205ENST00000538291 ZNF862O60290 1169 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 FAM20BO75063 409 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 RARAP10276 462 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 TRMT5Q32P41 509 aaKnown RBP17.07■□□□□ 0.32
SCARB1-205ENST00000538291 IL27RAQ6UWB1 636 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 ZNF621Q6ZSS3 439 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 COPS5Q92905 334 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 CAVIN3Q969G5 261 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 LIMD1Q9UGP4 676 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 DNPEPQ9ULA0 475 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 PCDHGA4Q9Y5G9 962 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 INPP4BO15327 924 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 ETS1P14921 441 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 COPZ1P61923 177 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 PCID2Q5JVF3 399 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 CYB5D1Q6P9G0 228 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 DNAJC14Q6Y2X3 702 aaPredicted RBP17.07■□□□□ 0.32
SCARB1-205ENST00000538291 ZFPM1Q8IX07 1006 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 MOSPD2Q8NHP6 518 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 HTATIP2Q9BUP3 242 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 IL22Q9GZX6 179 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 SERHL2Q9H4I8 314 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 SERHLQ9NQF3 203 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 LINC00854A0A1B0GVQ3 168 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 KPNA5O15131 536 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 SMNDC1O75940 238 aaKnown RBP eCLIP17.07■□□□□ 0.326e-24■■■■■ 32.4
SCARB1-205ENST00000538291 PPM1AP35813 382 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 NOGQ13253 232 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 METTL3Q86U44 580 aaKnown RBP17.07■□□□□ 0.32
SCARB1-205ENST00000538291 KRT73Q86Y46 540 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 TMEM237Q96Q45 408 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 ASB8Q9H765 288 aa17.07■□□□□ 0.32
SCARB1-205ENST00000538291 DDX3XO00571 662 aaKnown RBP eCLIP17.06■□□□□ 0.323e-8■■■■□ 25.9
SCARB1-205ENST00000538291 GLI1P08151 1106 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 BIKQ13323 160 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 RGMBQ6NW40 437 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 TRIT1Q9H3H1 467 aaKnown RBP17.06■□□□□ 0.32
SCARB1-205ENST00000538291 ATP13A3Q9H7F0 1226 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 GNPTGQ9UJJ9 305 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 PARNO95453 639 aaKnown RBP17.06■□□□□ 0.32
SCARB1-205ENST00000538291 COX7A2P14406 83 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 GPR1P46091 355 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 OASLQ15646 514 aaKnown RBP17.06■□□□□ 0.32
SCARB1-205ENST00000538291 ZNHIT3Q15649 155 aaPredicted RBP17.06■□□□□ 0.32
SCARB1-205ENST00000538291 PSTKQ8IV42 348 aaKnown RBP17.06■□□□□ 0.32
SCARB1-205ENST00000538291 KATNAL2Q8IYT4 538 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 NKAPQ8N5F7 415 aaKnown RBP17.06■□□□□ 0.32
SCARB1-205ENST00000538291 IL1RAPL1Q9NZN1 696 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 USP12O75317 370 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 SH3BGRLO75368 114 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 KDELR1P24390 212 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 DPYSL3Q14195 570 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 PRAMEF19Q5SWL8 479 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 HELQQ8TDG4 1101 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 FAM50BQ9Y247 325 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 SMIM31A0A1B0GVY4 71 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 TRIM24O15164 1050 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 LDLRP01130 860 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 ZNF24P17028 368 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 GLRA2P23416 452 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 FLT3P36888 993 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 DDR1Q08345 913 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 STX4Q12846 297 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 RAET1GQ6H3X3 334 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 SEMA4DQ92854 862 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 MRIQ9BWK5 157 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 AGXT2Q9BYV1 514 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 ZFYVE1Q9HBF4 777 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 AP3M1Q9Y2T2 418 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 NWD1Q149M9 1564 aa17.06■□□□□ 0.32
SCARB1-205ENST00000538291 CEP170BQ9Y4F5 1589 aaPredicted RBP17.06■□□□□ 0.32
SCARB1-205ENST00000538291 DIP2BQ9P265 1576 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 ANXA6P08133 673 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 HSPA14Q0VDF9 509 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 FBXL16Q8N461 479 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 C19orf18Q8NEA5 215 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 FAM45AQ8TCE6 357 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 APOL4Q9BPW4 351 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.05■□□□□ 0.321e-9■■■■□ 21
SCARB1-205ENST00000538291 SAE1Q9UBE0 346 aaPredicted RBP17.05■□□□□ 0.32
SCARB1-205ENST00000538291 SGTAO43765 313 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 IFNA16P05015 189 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 RPL21P46778 160 aaKnown RBP17.05■□□□□ 0.32
SCARB1-205ENST00000538291 TMED10P49755 219 aaKnown RBP17.05■□□□□ 0.32
SCARB1-205ENST00000538291 PFKPQ01813 784 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 INAQ16352 499 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 GPR142Q7Z601 462 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 STAG3L4Q8TBR4 150 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 MKL1Q969V6 931 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 FHDC1Q9C0D6 1143 aaPredicted RBP17.05■□□□□ 0.32
SCARB1-205ENST00000538291 BLOC1S4Q9NUP1 217 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 ATAD3AQ9NVI7 634 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 NINJ2Q9NZG7 142 aa17.05■□□□□ 0.32
SCARB1-205ENST00000538291 PEX1O43933 1283 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms