RNA–Protein interactions for RNA: ENST00000522250.5

FAM49B-220, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 1,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-220ENST00000522250 TLR4O00206 839 aa11.92□□□□□ -0.5
FAM49B-220ENST00000522250 CLDN11O75508 207 aa11.92□□□□□ -0.5
FAM49B-220ENST00000522250 CNTN5O94779 1100 aa11.92□□□□□ -0.5
FAM49B-220ENST00000522250 EPHA8P29322 1005 aaPredicted RBP11.92□□□□□ -0.5
FAM49B-220ENST00000522250 MAT2AP31153 395 aaKnown RBP11.92□□□□□ -0.5
FAM49B-220ENST00000522250 KRT9P35527 623 aa11.92□□□□□ -0.5
FAM49B-220ENST00000522250 CLDN6P56747 220 aa11.92□□□□□ -0.5
FAM49B-220ENST00000522250 DNAJC3Q13217 504 aa11.92□□□□□ -0.5
FAM49B-220ENST00000522250 ZNF177Q13360 481 aaPredicted RBP11.92□□□□□ -0.5
FAM49B-220ENST00000522250 DLG2Q15700 870 aa11.92□□□□□ -0.5
FAM49B-220ENST00000522250 ACCSLQ4AC99 568 aa11.92□□□□□ -0.5
FAM49B-220ENST00000522250 ALFQ53S48 1182 aa11.92□□□□□ -0.5
FAM49B-220ENST00000522250 MIIPQ5JXC2 388 aa11.92□□□□□ -0.5
FAM49B-220ENST00000522250 ARTNQ5T4W7 220 aa11.92□□□□□ -0.5
FAM49B-220ENST00000522250 NAPEPLDQ6IQ20 393 aa11.92□□□□□ -0.5
FAM49B-220ENST00000522250 KANSL1Q7Z3B3 1105 aa11.92□□□□□ -0.5
FAM49B-220ENST00000522250 SH2D3CQ8N5H7 860 aa11.92□□□□□ -0.5
FAM49B-220ENST00000522250 MLKLQ8NB16 471 aa11.92□□□□□ -0.5
FAM49B-220ENST00000522250 SKA1Q96BD8 255 aa11.92□□□□□ -0.5
FAM49B-220ENST00000522250 SIK2Q9H0K1 926 aa11.92□□□□□ -0.5
FAM49B-220ENST00000522250 ARHGEF38Q9NXL2 777 aa11.92□□□□□ -0.5
FAM49B-220ENST00000522250 DKK4Q9UBT3 224 aa11.92□□□□□ -0.5
FAM49B-220ENST00000522250 VPS28Q9UK41 221 aa11.92□□□□□ -0.5
FAM49B-220ENST00000522250 TPX2Q9ULW0 747 aaKnown RBP11.92□□□□□ -0.5
FAM49B-220ENST00000522250 ENC1O14682 589 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 MCF2LO15068 1137 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 ALOX15BO15296 676 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 SLC7A4O43246 635 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 SNAP91O60641 907 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 MT-CO1P00395 513 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 ITGAVP06756 1048 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 CTSLP07711 333 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 CXCR3P49682 368 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 TAS2R38P59533 333 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 MAN2A1Q16706 1144 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 COL28A1Q2UY09 1125 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 SMYD5Q6GMV2 418 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 DSG4Q86SJ6 1040 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 TRIM69Q86WT6 500 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 EID2Q8N6I1 236 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 MFSD2AQ8NA29 543 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 PIP4K2CQ8TBX8 421 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 NT5C3BQ969T7 300 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 CNDP2Q96KP4 475 aaKnown RBP11.91□□□□□ -0.5
FAM49B-220ENST00000522250 TKTL2Q9H0I9 626 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 KDM4CQ9H3R0 1056 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 SYNCQ9H7C4 482 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 TMPRSS4Q9NRS4 437 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 HS3ST2Q9Y278 367 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 CA5BQ9Y2D0 317 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 MYLKQ15746 1914 aa11.91□□□□□ -0.5
FAM49B-220ENST00000522250 K7ERQ8 282 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 RNF103O00237 685 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 YKT6O15498 198 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 BNIP3LO60238 219 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 SRCP12931 536 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 CDH5P33151 784 aaPredicted RBP11.9□□□□□ -0.5
FAM49B-220ENST00000522250 ACADVLP49748 655 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 SULT1E1P49888 294 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 CDH4P55283 916 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 RNASE9P60153 205 aaKnown RBP11.9□□□□□ -0.5
FAM49B-220ENST00000522250 CYP4F3Q08477 520 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 BNIP3Q12983 259 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 MTA1Q13330 715 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 COL9A2Q14055 689 aaPredicted RBP11.9□□□□□ -0.5
FAM49B-220ENST00000522250 DPCR1Q3MIW9 517 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 HSP90AA4PQ58FG1 418 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 PIP5KL1Q5T9C9 394 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 SFMBT2Q5VUG0 894 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 FAM46CQ5VWP2 391 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 TRNP1Q6NT89 227 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 PRPF39Q86UA1 669 aaKnown RBP11.9□□□□□ -0.5
FAM49B-220ENST00000522250 ZDHHC17Q8IUH5 632 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 PPP1R9BQ96SB3 815 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 TBCBQ99426 244 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 MUC3BQ9H195 1237 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 NDST4Q9H3R1 872 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 ERVMER34-1Q9H9K5 563 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.9□□□□□ -0.5
FAM49B-220ENST00000522250 VPS51Q9UID3 782 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 FHOD1Q9Y613 1164 aa11.9□□□□□ -0.5
FAM49B-220ENST00000522250 A0A0D9SEW6 157 aa11.89□□□□□ -0.51
FAM49B-220ENST00000522250 C1QTNF3-AMACRE9PGA6 284 aa11.89□□□□□ -0.51
FAM49B-220ENST00000522250 SMAD6O43541 496 aaKnown RBP11.89□□□□□ -0.51
FAM49B-220ENST00000522250 LDOC1O95751 146 aaPredicted RBP11.89□□□□□ -0.51
FAM49B-220ENST00000522250 RHOCP08134 193 aa11.89□□□□□ -0.51
FAM49B-220ENST00000522250 CYP11B1P15538 503 aa11.89□□□□□ -0.51
FAM49B-220ENST00000522250 RRM1P23921 792 aa11.89□□□□□ -0.51
FAM49B-220ENST00000522250 GABRB2P47870 512 aa11.89□□□□□ -0.51
FAM49B-220ENST00000522250 RXRGP48443 463 aa11.89□□□□□ -0.51
FAM49B-220ENST00000522250 ARRB1P49407 418 aaPredicted RBP11.89□□□□□ -0.51
FAM49B-220ENST00000522250 SNX16P57768 344 aa11.89□□□□□ -0.51
FAM49B-220ENST00000522250 KCNMA1Q12791 1236 aa11.89□□□□□ -0.51
FAM49B-220ENST00000522250 DRAP1Q14919 205 aaPredicted RBP11.89□□□□□ -0.51
FAM49B-220ENST00000522250 TPD52L1Q16890 204 aaPredicted RBP11.89□□□□□ -0.51
FAM49B-220ENST00000522250 VWA3BQ502W6 1294 aa11.89□□□□□ -0.51
FAM49B-220ENST00000522250 C2CD6Q53TS8 623 aa11.89□□□□□ -0.51
FAM49B-220ENST00000522250 SLC45A4Q5BKX6 768 aa11.89□□□□□ -0.51
FAM49B-220ENST00000522250 BRMS1LQ5PSV4 323 aa11.89□□□□□ -0.51
FAM49B-220ENST00000522250 XYLT1Q86Y38 959 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms