RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 RETREG1Q9H6L5 497 aa18.18■□□□□ 0.5
DDR1-272ENST00000513243 CDV3Q9UKY7 258 aaKnown RBP18.18■□□□□ 0.5
DDR1-272ENST00000513243 SCINQ9Y6U3 715 aa18.18■□□□□ 0.5
DDR1-272ENST00000513243 TNRC6BQ9UPQ9 1833 aaKnown RBP18.18■□□□□ 0.5
DDR1-272ENST00000513243 GON4LQ3T8J9 2241 aa18.18■□□□□ 0.5
DDR1-272ENST00000513243 CEP250Q9BV73 2442 aa18.18■□□□□ 0.5
DDR1-272ENST00000513243 SPTBN4Q9H254 2564 aa18.17■□□□□ 0.5
DDR1-272ENST00000513243 K7ERQ8 282 aa18.17■□□□□ 0.5
DDR1-272ENST00000513243 MID1O15344 667 aa18.17■□□□□ 0.5
DDR1-272ENST00000513243 ZMPSTE24O75844 475 aa18.17■□□□□ 0.5
DDR1-272ENST00000513243 SRCP12931 536 aa18.17■□□□□ 0.5
DDR1-272ENST00000513243 MAOBP27338 520 aa18.17■□□□□ 0.5
DDR1-272ENST00000513243 DPP6P42658 865 aa18.17■□□□□ 0.5
DDR1-272ENST00000513243 MAPKAPK2P49137 400 aa18.17■□□□□ 0.5
DDR1-272ENST00000513243 AIF1P55008 147 aa18.17■□□□□ 0.5
DDR1-272ENST00000513243 IRX4P78413 519 aa18.17■□□□□ 0.5
DDR1-272ENST00000513243 SEMA3BQ13214 749 aa18.17■□□□□ 0.5
DDR1-272ENST00000513243 TRIM14Q14142 442 aa18.17■□□□□ 0.5
DDR1-272ENST00000513243 ELAVL3Q14576 367 aaKnown RBP18.17■□□□□ 0.5
DDR1-272ENST00000513243 TTC31Q49AM3 519 aaPredicted RBP18.17■□□□□ 0.5
DDR1-272ENST00000513243 LINGO4Q6UY18 593 aa18.17■□□□□ 0.5
DDR1-272ENST00000513243 Q6ZVU0 165 aa18.17■□□□□ 0.5
DDR1-272ENST00000513243 OR8K1Q8NGG5 319 aa18.17■□□□□ 0.5
DDR1-272ENST00000513243 NETO1Q8TDF5 533 aa18.17■□□□□ 0.5
DDR1-272ENST00000513243 DNAJC7Q99615 494 aa18.17■□□□□ 0.5
DDR1-272ENST00000513243 THAP2Q9H0W7 228 aa18.17■□□□□ 0.5
DDR1-272ENST00000513243 MRPL47Q9HD33 250 aaKnown RBP18.17■□□□□ 0.5
DDR1-272ENST00000513243 TMEM248Q9NWD8 314 aa18.17■□□□□ 0.5
DDR1-272ENST00000513243 SERGEFQ9UGK8 458 aa18.17■□□□□ 0.5
DDR1-272ENST00000513243 DNAI1Q9UI46 699 aa18.17■□□□□ 0.5
DDR1-272ENST00000513243 SCML1Q9UN30 329 aa18.17■□□□□ 0.5
DDR1-272ENST00000513243 CEP192Q8TEP8 1941 aa18.17■□□□□ 0.5
DDR1-272ENST00000513243 LNP1A1A4G5 178 aa18.16■□□□□ 0.5
DDR1-272ENST00000513243 METTL12A8MUP2 240 aa18.16■□□□□ 0.5
DDR1-272ENST00000513243 CBX4O00257 560 aa18.16■□□□□ 0.5
DDR1-272ENST00000513243 SMAD6O43541 496 aaKnown RBP18.16■□□□□ 0.5
DDR1-272ENST00000513243 SDHBP21912 280 aa18.16■□□□□ 0.5
DDR1-272ENST00000513243 SLC8A1P32418 973 aa18.16■□□□□ 0.5
DDR1-272ENST00000513243 HOXD12P35452 270 aa18.16■□□□□ 0.5
DDR1-272ENST00000513243 ACVRL1P37023 503 aa18.16■□□□□ 0.5
DDR1-272ENST00000513243 EIF4A3P38919 411 aaKnown RBP18.16■□□□□ 0.5
DDR1-272ENST00000513243 PSMD8P48556 350 aa18.16■□□□□ 0.5
DDR1-272ENST00000513243 PUM1Q14671 1186 aaKnown RBP eCLIP18.16■□□□□ 0.5
DDR1-272ENST00000513243 TRIM61Q5EBN2 209 aa18.16■□□□□ 0.5
DDR1-272ENST00000513243 SYCP2LQ5T4T6 812 aa18.16■□□□□ 0.5
DDR1-272ENST00000513243 ALKBH5Q6P6C2 394 aaKnown RBP18.16■□□□□ 0.5
DDR1-272ENST00000513243 USP30Q70CQ3 517 aa18.16■□□□□ 0.5
DDR1-272ENST00000513243 ATP11CQ8NB49 1132 aa18.16■□□□□ 0.5
DDR1-272ENST00000513243 GANCQ8TET4 914 aa18.16■□□□□ 0.5
DDR1-272ENST00000513243 PEBP4Q96S96 227 aa18.16■□□□□ 0.5
DDR1-272ENST00000513243 ACE2Q9BYF1 805 aaPredicted RBP18.16■□□□□ 0.5
DDR1-272ENST00000513243 BTBD1Q9H0C5 482 aa18.16■□□□□ 0.5
DDR1-272ENST00000513243 ATP13A1Q9HD20 1204 aa18.16■□□□□ 0.5
DDR1-272ENST00000513243 GPATCH2LQ9NWQ4 482 aa18.16■□□□□ 0.5
DDR1-272ENST00000513243 FBXL12Q9NXK8 326 aa18.16■□□□□ 0.5
DDR1-272ENST00000513243 PCSK1NQ9UHG2 260 aa18.16■□□□□ 0.5
DDR1-272ENST00000513243 EVLQ9UI08 416 aaPredicted RBP18.16■□□□□ 0.5
DDR1-272ENST00000513243 NENFQ9UMX5 172 aa18.16■□□□□ 0.5
DDR1-272ENST00000513243 A0A1W2PP55 124 aa18.15■□□□□ 0.5
DDR1-272ENST00000513243 SLC30A4O14863 429 aa18.15■□□□□ 0.5
DDR1-272ENST00000513243 CREB3O43889 395 aa18.15■□□□□ 0.5
DDR1-272ENST00000513243 RNF8O76064 485 aa18.15■□□□□ 0.5
DDR1-272ENST00000513243 IL1BP01584 269 aa18.15■□□□□ 0.5
DDR1-272ENST00000513243 EPHB2P29323 1055 aa18.15■□□□□ 0.5
DDR1-272ENST00000513243 MIPP30301 263 aa18.15■□□□□ 0.5
DDR1-272ENST00000513243 ARF5P84085 180 aa18.15■□□□□ 0.5
DDR1-272ENST00000513243 CCDC122Q5T0U0 273 aa18.15■□□□□ 0.5
DDR1-272ENST00000513243 DCAF12L1Q5VU92 463 aa18.15■□□□□ 0.5
DDR1-272ENST00000513243 IL31Q6EBC2 164 aa18.15■□□□□ 0.5
DDR1-272ENST00000513243 RETSATQ6NUM9 610 aa18.15■□□□□ 0.5
DDR1-272ENST00000513243 SLC23A3Q6PIS1 610 aa18.15■□□□□ 0.5
DDR1-272ENST00000513243 RGL4Q8IZJ4 473 aa18.15■□□□□ 0.5
DDR1-272ENST00000513243 AADATQ8N5Z0 425 aa18.15■□□□□ 0.5
DDR1-272ENST00000513243 RTL3Q8N8U3 475 aaKnown RBP18.15■□□□□ 0.5
DDR1-272ENST00000513243 DNASE2BQ8WZ79 361 aa18.15■□□□□ 0.5
DDR1-272ENST00000513243 OR8D1Q8WZ84 308 aa18.15■□□□□ 0.5
DDR1-272ENST00000513243 EPAS1Q99814 870 aa18.15■□□□□ 0.5
DDR1-272ENST00000513243 PCED1AQ9H1Q7 454 aa18.15■□□□□ 0.5
DDR1-272ENST00000513243 NEUROG2Q9H2A3 272 aa18.15■□□□□ 0.5
DDR1-272ENST00000513243 C6orf106Q9H6K1 298 aaPredicted RBP18.15■□□□□ 0.5
DDR1-272ENST00000513243 NCKAP1Q9Y2A7 1128 aa18.15■□□□□ 0.5
DDR1-272ENST00000513243 NUMA1Q14980 2115 aa18.14■□□□□ 0.5
DDR1-272ENST00000513243 MEI4A8MW99 385 aa18.14■□□□□ 0.49
DDR1-272ENST00000513243 MCF2LO15068 1137 aa18.14■□□□□ 0.49
DDR1-272ENST00000513243 BNIP3LO60238 219 aa18.14■□□□□ 0.49
DDR1-272ENST00000513243 LRCH4O75427 683 aa18.14■□□□□ 0.49
DDR1-272ENST00000513243 SEMA4FO95754 770 aa18.14■□□□□ 0.49
DDR1-272ENST00000513243 CFIP05156 583 aa18.14■□□□□ 0.49
DDR1-272ENST00000513243 CYP1A2P05177 515 aa18.14■□□□□ 0.49
DDR1-272ENST00000513243 C5AR1P21730 350 aa18.14■□□□□ 0.49
DDR1-272ENST00000513243 ETFBP38117 255 aa18.14■□□□□ 0.49
DDR1-272ENST00000513243 CLCN6P51797 869 aa18.14■□□□□ 0.49
DDR1-272ENST00000513243 METAP1P53582 386 aa18.14■□□□□ 0.49
DDR1-272ENST00000513243 LIMK1P53667 647 aa18.14■□□□□ 0.49
DDR1-272ENST00000513243 GFPT1Q06210 699 aaPredicted RBP18.14■□□□□ 0.49
DDR1-272ENST00000513243 CA9Q16790 459 aa18.14■□□□□ 0.49
DDR1-272ENST00000513243 DUOXA1Q1HG43 343 aa18.14■□□□□ 0.49
DDR1-272ENST00000513243 WDR45BQ5MNZ6 344 aa18.14■□□□□ 0.49
DDR1-272ENST00000513243 ERMARDQ5T6L9 678 aa18.14■□□□□ 0.49
DDR1-272ENST00000513243 STPG1Q5TH74 334 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms