RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 HPCAL4Q9UM19 191 aa18.83■□□□□ 0.6
SMIM4-204ENST00000482728 AP4E1Q9UPM8 1137 aa18.83■□□□□ 0.6
SMIM4-204ENST00000482728 DAPK3O43293 454 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 ATP9BO43861 1147 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 RAMP2O60895 175 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 LRCH4O75427 683 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 HTR7P34969 479 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 PCK1P35558 622 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 MPLP40238 635 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 TPI1P60174 286 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 SLC20A2Q08357 652 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 CSRP2Q16527 193 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 BOLA3Q53S33 107 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 ARMCX6Q7L4S7 300 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 CYP2U1Q7Z449 544 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 DSG4Q86SJ6 1040 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 FAM124AQ86V42 546 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 NLRP14Q86W24 1093 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 PSTKQ8IV42 348 aaKnown RBP18.82■□□□□ 0.6
SMIM4-204ENST00000482728 MMAAQ8IVH4 418 aaKnown RBP18.82■□□□□ 0.6
SMIM4-204ENST00000482728 STK40Q8N2I9 435 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 SH2D3CQ8N5H7 860 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 PTPRN2Q92932 1015 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 ARHGEF26Q96DR7 871 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 MAGEH1Q9H213 219 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 CD93Q9NPY3 652 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 SEMA4GQ9NTN9 838 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 NENFQ9UMX5 172 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 SCML1Q9UN30 329 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 HS3ST2Q9Y278 367 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 NCKAP1Q9Y2A7 1128 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 FARP1Q9Y4F1 1045 aaPredicted RBP18.82■□□□□ 0.6
SMIM4-204ENST00000482728 FRYLO94915 3013 aa18.82■□□□□ 0.6
SMIM4-204ENST00000482728 BCLAF3A2AJT9 711 aaKnown RBP18.81■□□□□ 0.6
SMIM4-204ENST00000482728 EEF2KO00418 725 aaKnown RBP18.81■□□□□ 0.6
SMIM4-204ENST00000482728 FGF10O15520 208 aaPredicted RBP18.81■□□□□ 0.6
SMIM4-204ENST00000482728 BNIP3LO60238 219 aa18.81■□□□□ 0.6
SMIM4-204ENST00000482728 FOXD2O60548 495 aaPredicted RBP18.81■□□□□ 0.6
SMIM4-204ENST00000482728 MT-CO1P00395 513 aa18.81■□□□□ 0.6
SMIM4-204ENST00000482728 PTGER3P43115 390 aa18.81■□□□□ 0.6
SMIM4-204ENST00000482728 ELAVL3Q14576 367 aaKnown RBP18.81■□□□□ 0.6
SMIM4-204ENST00000482728 POLD3Q15054 466 aaPredicted RBP18.81■□□□□ 0.6
SMIM4-204ENST00000482728 CCDC6Q16204 474 aa18.81■□□□□ 0.6
SMIM4-204ENST00000482728 PPP6R3Q5H9R7 873 aaPredicted RBP18.81■□□□□ 0.6
SMIM4-204ENST00000482728 LYSMD4Q5XG99 296 aa18.81■□□□□ 0.6
SMIM4-204ENST00000482728 LINGO4Q6UY18 593 aa18.81■□□□□ 0.6
SMIM4-204ENST00000482728 ZNF354CQ86Y25 554 aa18.81■□□□□ 0.6
SMIM4-204ENST00000482728 RTL3Q8N8U3 475 aaKnown RBP18.81■□□□□ 0.6
SMIM4-204ENST00000482728 FRS2Q8WU20 508 aa18.81■□□□□ 0.6
SMIM4-204ENST00000482728 OR8D1Q8WZ84 308 aa18.81■□□□□ 0.6
SMIM4-204ENST00000482728 PIGKQ92643 395 aa18.81■□□□□ 0.6
SMIM4-204ENST00000482728 FAM129BQ96TA1 746 aa18.81■□□□□ 0.6
SMIM4-204ENST00000482728 SNRNP25Q9BV90 132 aaKnown RBP18.81■□□□□ 0.6
SMIM4-204ENST00000482728 GPR174Q9BXC1 333 aa18.81■□□□□ 0.6
SMIM4-204ENST00000482728 PARD6AQ9NPB6 346 aa18.81■□□□□ 0.6
SMIM4-204ENST00000482728 VPS45Q9NRW7 570 aa18.81■□□□□ 0.6
SMIM4-204ENST00000482728 NDFIP2Q9NV92 336 aa18.81■□□□□ 0.6
SMIM4-204ENST00000482728 WSB2Q9NYS7 404 aaPredicted RBP18.81■□□□□ 0.6
SMIM4-204ENST00000482728 UVRAGQ9P2Y5 699 aa18.81■□□□□ 0.6
SMIM4-204ENST00000482728 IL1BP01584 269 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 IGLV3-19P01714 112 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 ZNF806P0C7X5 589 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 SRCP12931 536 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 VAV1P15498 845 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 TGM1P22735 817 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 GLDCP23378 1020 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 SLC8A1P32418 973 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 ACVRL1P37023 503 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 DPP6P42658 865 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 SSR1P43307 286 aaKnown RBP18.8■□□□□ 0.6
SMIM4-204ENST00000482728 CLCN6P51797 869 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 ZNF33AQ06730 810 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 SEMA3BQ13214 749 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 CST6Q15828 149 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 SYCP2LQ5T4T6 812 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 TC2NQ8N9U0 490 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 C12orf50Q8NA57 414 aaPredicted RBP18.8■□□□□ 0.6
SMIM4-204ENST00000482728 ZNF564Q8TBZ8 553 aaPredicted RBP18.8■□□□□ 0.6
SMIM4-204ENST00000482728 FOXJ1Q92949 421 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 ARHGEF2Q92974 986 aaKnown RBP18.8■□□□□ 0.6
SMIM4-204ENST00000482728 BTBD6Q96KE9 485 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 CCDC114Q96M63 670 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 PEBP4Q96S96 227 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 OMDQ99983 421 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 PACSIN1Q9BY11 444 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 ACE2Q9BYF1 805 aaPredicted RBP18.8■□□□□ 0.6
SMIM4-204ENST00000482728 PABPC3Q9H361 631 aaKnown RBP18.8■□□□□ 0.6
SMIM4-204ENST00000482728 SPTLC3Q9NUV7 552 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 FBXL12Q9NXK8 326 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 MUC22E2RYF6 1773 aaPredicted RBP18.8■□□□□ 0.6
SMIM4-204ENST00000482728 PLXND1Q9Y4D7 1925 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 CEP250Q9BV73 2442 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 SPTBN4Q9H254 2564 aa18.8■□□□□ 0.6
SMIM4-204ENST00000482728 K7ERQ8 282 aa18.79■□□□□ 0.6
SMIM4-204ENST00000482728 TMEM253P0C7T8 217 aa18.79■□□□□ 0.6
SMIM4-204ENST00000482728 C7P10643 843 aa18.79■□□□□ 0.6
SMIM4-204ENST00000482728 RECQLP46063 649 aaPredicted RBP18.79■□□□□ 0.6
SMIM4-204ENST00000482728 PSMD8P48556 350 aa18.79■□□□□ 0.6
SMIM4-204ENST00000482728 ZNF135P52742 658 aaPredicted RBP18.79■□□□□ 0.6
SMIM4-204ENST00000482728 GEMIN4P57678 1058 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms