RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 RXRGP48443 463 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 CDH4P55283 916 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 UBE2HP62256 183 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 CYP4F3Q08477 520 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 CNTN1Q12860 1018 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 MAN2A1Q16706 1144 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 COL28A1Q2UY09 1125 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 POM121L1PQ3SYA9 428 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 ACCSLQ4AC99 568 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 BRMS1LQ5PSV4 323 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 PRPF39Q86UA1 669 aaKnown RBP11.67□□□□□ -0.54
HDLBP-236ENST00000477477 IQCHQ86VS3 1027 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 TMPRSS12Q86WS5 348 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 TRIM69Q86WT6 500 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 SPATS2Q86XZ4 545 aaKnown RBP11.67□□□□□ -0.54
HDLBP-236ENST00000477477 ZDHHC17Q8IUH5 632 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 FAM71AQ8IYT1 594 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 PDCD7Q8N8D1 485 aaKnown RBP11.67□□□□□ -0.54
HDLBP-236ENST00000477477 MFSD2AQ8NA29 543 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 MLKLQ8NB16 471 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 PIP4K2CQ8TBX8 421 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 NPY6RQ99463 290 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 TKTL2Q9H0I9 626 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 SIK2Q9H0K1 926 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 PLCB1Q9NQ66 1216 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 ANLNQ9NQW6 1124 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 PIGVQ9NUD9 493 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 ARHGEF38Q9NXL2 777 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 RRN3Q9NYV6 651 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 DMTF1Q9Y222 760 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 HS3ST2Q9Y278 367 aa11.67□□□□□ -0.54
HDLBP-236ENST00000477477 COL5A1P20908 1838 aaPredicted RBP11.67□□□□□ -0.54
HDLBP-236ENST00000477477 NYNRINQ9P2P1 1898 aaKnown RBP11.66□□□□□ -0.54
HDLBP-236ENST00000477477 E9PAM4 449 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 I6L893 689 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-236ENST00000477477 BNIP3LO60238 219 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 CNTN5O94779 1100 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 ADCY5O95622 1261 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 RHOCP08134 193 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 SRCP12931 536 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 ZNF18P17022 549 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 TFE3P19532 575 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-236ENST00000477477 CDH5P33151 784 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-236ENST00000477477 CXCR3P49682 368 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 ACADVLP49748 655 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 SULT1E1P49888 294 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 TAS2R38P59533 333 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 OVGP1Q12889 678 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 BNIP3Q12983 259 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 DNAJC3Q13217 504 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 COL9A2Q14055 689 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-236ENST00000477477 ALFQ53S48 1182 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 SFMBT2Q5VUG0 894 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 PDZD3Q86UT5 571 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 ZNF683Q8IZ20 524 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 EID2Q8N6I1 236 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 DCAF4L2Q8NA75 395 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 TSC1Q92574 1164 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 PGAP3Q96FM1 320 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-236ENST00000477477 PSMB7Q99436 277 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 MUC3BQ9H195 1237 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 WDCPQ9H6R7 721 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 PREBQ9HCU5 417 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 SCUBE2Q9NQ36 999 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.66□□□□□ -0.54
HDLBP-236ENST00000477477 STAP1Q9ULZ2 295 aa11.66□□□□□ -0.54
HDLBP-236ENST00000477477 PRAMEF26H0Y7S4 382 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 SNAP91O60641 907 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 MAGEC1O60732 1142 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 MT-CO1P00395 513 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 CTSLP07711 333 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 C1SP09871 688 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 CDK4P11802 303 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 SCNN1AP37088 669 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 GABRB2P47870 512 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 CLDN6P56747 220 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 BPIFB4P59827 614 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 RNASE9P60153 205 aaKnown RBP11.65□□□□□ -0.54
HDLBP-236ENST00000477477 KRT83P78385 493 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 DEUP1Q05D60 604 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 DRAP1Q14919 205 aaPredicted RBP11.65□□□□□ -0.54
HDLBP-236ENST00000477477 TPD52L1Q16890 204 aaPredicted RBP11.65□□□□□ -0.54
HDLBP-236ENST00000477477 SETMARQ53H47 684 aaPredicted RBP11.65□□□□□ -0.54
HDLBP-236ENST00000477477 MIIPQ5JXC2 388 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 PIP5KL1Q5T9C9 394 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 DPY19L2P1Q6NXN4 242 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 KANSL1Q7Z3B3 1105 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 SETD3Q86TU7 594 aaPredicted RBP11.65□□□□□ -0.54
HDLBP-236ENST00000477477 FAM114A1Q8IWE2 563 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 ATP11CQ8NB49 1132 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 TMEM35BQ8NCS4 154 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 OR2A12Q8NGT7 310 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 HNRNPLLQ8WVV9 542 aaKnown RBP11.65□□□□□ -0.54
HDLBP-236ENST00000477477 NT5C3BQ969T7 300 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 CCDC114Q96M63 670 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 C2orf49Q9BVC5 232 aaPredicted RBP11.65□□□□□ -0.54
HDLBP-236ENST00000477477 NDST4Q9H3R1 872 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 VPS51Q9UID3 782 aa11.65□□□□□ -0.54
HDLBP-236ENST00000477477 FARP1Q9Y4F1 1045 aaPredicted RBP11.65□□□□□ -0.54
HDLBP-236ENST00000477477 SNX10Q9Y5X0 201 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms