RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 SNX16P57768 344 aa17.74■□□□□ 0.43
TRIM56-203ENST00000467847 CNTN1Q12860 1018 aa17.74■□□□□ 0.43
TRIM56-203ENST00000467847 DLG2Q15700 870 aa17.74■□□□□ 0.43
TRIM56-203ENST00000467847 EXOC3L4Q17RC7 722 aa17.74■□□□□ 0.43
TRIM56-203ENST00000467847 AGBL4Q5VU57 503 aa17.74■□□□□ 0.43
TRIM56-203ENST00000467847 OLFML1Q6UWY5 402 aa17.74■□□□□ 0.43
TRIM56-203ENST00000467847 Q6ZVU0 165 aa17.74■□□□□ 0.43
TRIM56-203ENST00000467847 SPATS2Q86XZ4 545 aaKnown RBP17.74■□□□□ 0.43
TRIM56-203ENST00000467847 C1orf131Q8NDD1 294 aaKnown RBP17.74■□□□□ 0.43
TRIM56-203ENST00000467847 SHC3Q92529 594 aa17.74■□□□□ 0.43
TRIM56-203ENST00000467847 SYNCQ9H7C4 482 aa17.74■□□□□ 0.43
TRIM56-203ENST00000467847 ARHGAP20Q9P2F6 1191 aa17.74■□□□□ 0.43
TRIM56-203ENST00000467847 PPM1HQ9ULR3 514 aa17.74■□□□□ 0.43
TRIM56-203ENST00000467847 DMTF1Q9Y222 760 aa17.74■□□□□ 0.43
TRIM56-203ENST00000467847 HS3ST4Q9Y661 456 aa17.74■□□□□ 0.43
TRIM56-203ENST00000467847 HELZ2Q9BYK8 2649 aaKnown RBP17.74■□□□□ 0.43
TRIM56-203ENST00000467847 MYLKQ15746 1914 aa17.74■□□□□ 0.43
TRIM56-203ENST00000467847 MCF2LO15068 1137 aa17.73■□□□□ 0.43
TRIM56-203ENST00000467847 ALOX15BO15296 676 aa17.73■□□□□ 0.43
TRIM56-203ENST00000467847 BNIP3LO60238 219 aa17.73■□□□□ 0.43
TRIM56-203ENST00000467847 PAGE1O75459 146 aa17.73■□□□□ 0.43
TRIM56-203ENST00000467847 CLDN11O75508 207 aa17.73■□□□□ 0.43
TRIM56-203ENST00000467847 DAB1O75553 588 aa17.73■□□□□ 0.43
TRIM56-203ENST00000467847 ERBB2P04626 1255 aa17.73■□□□□ 0.43
TRIM56-203ENST00000467847 KRT9P35527 623 aa17.73■□□□□ 0.43
TRIM56-203ENST00000467847 RXRGP48443 463 aa17.73■□□□□ 0.43
TRIM56-203ENST00000467847 ACADVLP49748 655 aa17.73■□□□□ 0.43
TRIM56-203ENST00000467847 PTK2Q05397 1052 aa17.73■□□□□ 0.43
TRIM56-203ENST00000467847 BNIP3Q12983 259 aa17.73■□□□□ 0.43
TRIM56-203ENST00000467847 IQCHQ86VS3 1027 aa17.73■□□□□ 0.43
TRIM56-203ENST00000467847 TRIM69Q86WT6 500 aa17.73■□□□□ 0.43
TRIM56-203ENST00000467847 SH2D3CQ8N5H7 860 aa17.73■□□□□ 0.43
TRIM56-203ENST00000467847 PIP4K2CQ8TBX8 421 aa17.73■□□□□ 0.43
TRIM56-203ENST00000467847 NXPE2Q96DL1 559 aa17.73■□□□□ 0.43
TRIM56-203ENST00000467847 SIK2Q9H0K1 926 aa17.73■□□□□ 0.43
TRIM56-203ENST00000467847 MUC3BQ9H195 1237 aa17.73■□□□□ 0.43
TRIM56-203ENST00000467847 OR51B4Q9Y5P0 310 aa17.73■□□□□ 0.43
TRIM56-203ENST00000467847 A0A087WV48 116 aa17.72■□□□□ 0.43
TRIM56-203ENST00000467847 M0QYT0 321 aa17.72■□□□□ 0.43
TRIM56-203ENST00000467847 MAGEC1O60732 1142 aa17.72■□□□□ 0.43
TRIM56-203ENST00000467847 PON1P27169 355 aa17.72■□□□□ 0.43
TRIM56-203ENST00000467847 NOS2P35228 1153 aa17.72■□□□□ 0.43
TRIM56-203ENST00000467847 CDH4P55283 916 aa17.72■□□□□ 0.43
TRIM56-203ENST00000467847 SLC6A3Q01959 620 aa17.72■□□□□ 0.43
TRIM56-203ENST00000467847 OVGP1Q12889 678 aa17.72■□□□□ 0.43
TRIM56-203ENST00000467847 STAT4Q14765 748 aa17.72■□□□□ 0.43
TRIM56-203ENST00000467847 SETMARQ53H47 684 aaPredicted RBP17.72■□□□□ 0.43
TRIM56-203ENST00000467847 C6orf118Q5T5N4 469 aa17.72■□□□□ 0.43
TRIM56-203ENST00000467847 SFMBT2Q5VUG0 894 aa17.72■□□□□ 0.43
TRIM56-203ENST00000467847 SLC26A9Q7LBE3 791 aa17.72■□□□□ 0.43
TRIM56-203ENST00000467847 C14orf80Q86SX3 495 aa17.72■□□□□ 0.43
TRIM56-203ENST00000467847 TSC1Q92574 1164 aa17.72■□□□□ 0.43
TRIM56-203ENST00000467847 DCBLD2Q96PD2 775 aa17.72■□□□□ 0.43
TRIM56-203ENST00000467847 TBC1D30Q9Y2I9 924 aa17.72■□□□□ 0.43
TRIM56-203ENST00000467847 ASXL3Q9C0F0 2248 aa17.72■□□□□ 0.43
TRIM56-203ENST00000467847 GTPBP10A4D1E9 387 aaKnown RBP17.71■□□□□ 0.43
TRIM56-203ENST00000467847 PRAMEF26H0Y7S4 382 aa17.71■□□□□ 0.43
TRIM56-203ENST00000467847 PTPN20Q4JDL3 420 aa17.71■□□□□ 0.43
TRIM56-203ENST00000467847 HES3Q5TGS1 186 aa17.71■□□□□ 0.43
TRIM56-203ENST00000467847 SLC47A2Q86VL8 602 aa17.71■□□□□ 0.43
TRIM56-203ENST00000467847 PREBQ9HCU5 417 aa17.71■□□□□ 0.43
TRIM56-203ENST00000467847 PLCB1Q9NQ66 1216 aa17.71■□□□□ 0.43
TRIM56-203ENST00000467847 PIGVQ9NUD9 493 aa17.71■□□□□ 0.43
TRIM56-203ENST00000467847 KIAA1468Q9P260 1216 aa17.71■□□□□ 0.43
TRIM56-203ENST00000467847 AJAP1Q9UKB5 411 aaPredicted RBP17.71■□□□□ 0.43
TRIM56-203ENST00000467847 HS3ST2Q9Y278 367 aa17.71■□□□□ 0.43
TRIM56-203ENST00000467847 FARP1Q9Y4F1 1045 aaPredicted RBP17.71■□□□□ 0.43
TRIM56-203ENST00000467847 SDC3O75056 442 aa17.7■□□□□ 0.42
TRIM56-203ENST00000467847 CNTN5O94779 1100 aa17.7■□□□□ 0.42
TRIM56-203ENST00000467847 MT-CO1P00395 513 aa17.7■□□□□ 0.42
TRIM56-203ENST00000467847 RHOCP08134 193 aa17.7■□□□□ 0.42
TRIM56-203ENST00000467847 SRCP12931 536 aa17.7■□□□□ 0.42
TRIM56-203ENST00000467847 CKMT2P17540 419 aa17.7■□□□□ 0.42
TRIM56-203ENST00000467847 MTIF2P46199 727 aaKnown RBP17.7■□□□□ 0.42
TRIM56-203ENST00000467847 KRT83P78385 493 aa17.7■□□□□ 0.42
TRIM56-203ENST00000467847 TARDBPQ13148 414 aaKnown RBP eCLIP17.7■□□□□ 0.42
TRIM56-203ENST00000467847 CAMK4Q16566 473 aa17.7■□□□□ 0.42
TRIM56-203ENST00000467847 C5orf22Q49AR2 442 aa17.7■□□□□ 0.42
TRIM56-203ENST00000467847 OTUD1Q5VV17 481 aaPredicted RBP17.7■□□□□ 0.42
TRIM56-203ENST00000467847 FBXL19Q6PCT2 694 aa17.7■□□□□ 0.42
TRIM56-203ENST00000467847 KANSL1Q7Z3B3 1105 aa17.7■□□□□ 0.42
TRIM56-203ENST00000467847 ZDHHC17Q8IUH5 632 aa17.7■□□□□ 0.42
TRIM56-203ENST00000467847 ATP11CQ8NB49 1132 aa17.7■□□□□ 0.42
TRIM56-203ENST00000467847 ZNF397Q8NF99 534 aaPredicted RBP17.7■□□□□ 0.42
TRIM56-203ENST00000467847 CCDC114Q96M63 670 aa17.7■□□□□ 0.42
TRIM56-203ENST00000467847 UBL7Q96S82 380 aaPredicted RBP17.7■□□□□ 0.42
TRIM56-203ENST00000467847 C2orf49Q9BVC5 232 aaPredicted RBP17.7■□□□□ 0.42
TRIM56-203ENST00000467847 TKTL2Q9H0I9 626 aa17.7■□□□□ 0.42
TRIM56-203ENST00000467847 WDCPQ9H6R7 721 aa17.7■□□□□ 0.42
TRIM56-203ENST00000467847 SIX2Q9NPC8 291 aa17.7■□□□□ 0.42
TRIM56-203ENST00000467847 RRN3Q9NYV6 651 aa17.7■□□□□ 0.42
TRIM56-203ENST00000467847 DNAJC12Q9UKB3 198 aa17.7■□□□□ 0.42
TRIM56-203ENST00000467847 CA5BQ9Y2D0 317 aa17.7■□□□□ 0.42
TRIM56-203ENST00000467847 AK5Q9Y6K8 562 aa17.7■□□□□ 0.42
TRIM56-203ENST00000467847 TDRD6O60522 2096 aaKnown RBP17.7■□□□□ 0.42
TRIM56-203ENST00000467847 FOXN3O00409 490 aaPredicted RBP17.69■□□□□ 0.42
TRIM56-203ENST00000467847 KPNA3O00505 521 aaPredicted RBP17.69■□□□□ 0.42
TRIM56-203ENST00000467847 SNAP91O60641 907 aa17.69■□□□□ 0.42
TRIM56-203ENST00000467847 RNGTTO60942 597 aaKnown RBP17.69■□□□□ 0.42
TRIM56-203ENST00000467847 ADCY5O95622 1261 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms