RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 SLC4A7Q9Y6M7 1214 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 ALPK3Q96L96 1907 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 ZNF638Q14966 1978 aaKnown RBP10.62□□□□□ -0.71
HERC4-207ENST00000460168 hCG_2014768A0A024R1R8 64 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 IGLV3-25P01717 112 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 ZSCAN5DPP0CG00 497 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 ATF6P18850 670 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 IVDP26440 423 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 CCR1P32246 355 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 SKIV2L2P42285 1042 aaKnown RBP10.62□□□□□ -0.71
HERC4-207ENST00000460168 NR2C2P49116 596 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 PLXNA3P51805 1871 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 ITGA8P53708 1063 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 GDF10P55107 478 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 TPI1P60174 286 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 GPS1Q13098 491 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 C10orf62Q5T681 223 aaPredicted RBP10.62□□□□□ -0.71
HERC4-207ENST00000460168 TPGS2Q68CL5 300 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 UNC5DQ6UXZ4 953 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 FAM71DQ8N9W8 422 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 TSEN2Q8NCE0 465 aaKnown RBP10.62□□□□□ -0.71
HERC4-207ENST00000460168 BBOF1Q8ND07 529 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 WDR60Q8WVS4 1066 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 AUTS2Q8WXX7 1259 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 TBC1D20Q96BZ9 403 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 STAMBPL1Q96FJ0 436 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 SERPINB11Q96P15 392 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 CYP4F11Q9HBI6 524 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 PCDH9Q9HC56 1237 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 ANLNQ9NQW6 1124 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 MRPL17Q9NRX2 175 aaKnown RBP10.62□□□□□ -0.71
HERC4-207ENST00000460168 IL37Q9NZH6 218 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 OR12D3Q9UGF7 316 aa10.62□□□□□ -0.71
HERC4-207ENST00000460168 COL4A4P53420 1690 aaPredicted RBP10.62□□□□□ -0.71
HERC4-207ENST00000460168 FAM92AA1XBS5 289 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 FAM72CH0Y354 149 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 I6L893 689 aaPredicted RBP10.61□□□□□ -0.71
HERC4-207ENST00000460168 FGF18O76093 207 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 WEE1P30291 646 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 B2MP61769 119 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 CAV1Q03135 178 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 GBE1Q04446 702 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 RIPK1Q13546 671 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 BRMS1LQ5PSV4 323 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 TMEM240Q5SV17 173 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 FAM72AQ5TYM5 149 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 IZUMO3Q5VZ72 239 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 NCBP2-AS2Q69YL0 99 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 FAM72DQ6L9T8 149 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 LVRNQ6Q4G3 990 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 RFX8Q6ZV50 586 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 TMC3Q7Z5M5 1100 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 CCDC25Q86WR0 208 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 FAM72BQ86X60 149 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 UNC45BQ8IWX7 931 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 MREGQ8N565 214 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 UBLCP1Q8WVY7 318 aaPredicted RBP10.61□□□□□ -0.71
HERC4-207ENST00000460168 NSRP1Q9H0G5 558 aaKnown RBP10.61□□□□□ -0.71
HERC4-207ENST00000460168 SIK2Q9H0K1 926 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 ETNK2Q9NVF9 386 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 ANAPC5Q9UJX4 755 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 KIAA1671Q9BY89 1806 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 LOC105371267A0A1B0GV96 52 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 SLC38A8A6NNN8 435 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 RNF40O75150 1001 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 ABLIM3O94929 683 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 ANP32DO95626 131 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 STAMBPO95630 424 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 RARGP13631 454 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 POLR2EP19388 210 aaKnown RBP10.61□□□□□ -0.71
HERC4-207ENST00000460168 HSPA9P38646 679 aaKnown RBP10.61□□□□□ -0.71
HERC4-207ENST00000460168 HTRA4P83105 476 aaPredicted RBP10.61□□□□□ -0.71
HERC4-207ENST00000460168 EFEMP1Q12805 493 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 XRCC4Q13426 336 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 TAF12Q16514 161 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 SCAIQ8N9R8 606 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 GALNT6Q8NCL4 622 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 B3GNT4Q9C0J1 378 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 NDFIP2Q9NV92 336 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 KCTD5Q9NXV2 234 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 CLIC5Q9NZA1 410 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 NOP53Q9NZM5 478 aaKnown RBP10.61□□□□□ -0.71
HERC4-207ENST00000460168 MFHAS1Q9Y4C4 1052 aa10.61□□□□□ -0.71
HERC4-207ENST00000460168 PRRG1O14668 218 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 KCNN4O15554 427 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 TLL1O43897 1013 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 MOCS2O96007 188 aaPredicted RBP10.6□□□□□ -0.71
HERC4-207ENST00000460168 GSTT2P0CG29 244 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 GSTT2BP0CG30 244 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 GGCXP38435 758 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 ALDH1A3P47895 512 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 SLC10A2Q12908 348 aaPredicted RBP10.6□□□□□ -0.71
HERC4-207ENST00000460168 MRPL28Q13084 256 aaKnown RBP10.6□□□□□ -0.71
HERC4-207ENST00000460168 SEMA3BQ13214 749 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 EIF4EBP2Q13542 120 aaPredicted RBP10.6□□□□□ -0.71
HERC4-207ENST00000460168 C10orf120Q5SQS8 335 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 GRAMD4Q6IC98 578 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 MSANTD2Q6P1R3 559 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 CCDC33Q8N5R6 958 aa10.6□□□□□ -0.71
HERC4-207ENST00000460168 ZNF512Q96ME7 567 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms