RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 PSMD8P48556 350 aa19.24■□□□□ 0.67
HDAC4-203ENST00000445704 KRT83P78385 493 aa19.24■□□□□ 0.67
HDAC4-203ENST00000445704 GNA12Q03113 381 aa19.24■□□□□ 0.67
HDAC4-203ENST00000445704 ELAVL3Q14576 367 aaKnown RBP19.24■□□□□ 0.67
HDAC4-203ENST00000445704 TTC31Q49AM3 519 aaPredicted RBP19.24■□□□□ 0.67
HDAC4-203ENST00000445704 ACCSLQ4AC99 568 aa19.24■□□□□ 0.67
HDAC4-203ENST00000445704 EFHC2Q5JST6 749 aa19.24■□□□□ 0.67
HDAC4-203ENST00000445704 DCAF12L1Q5VU92 463 aa19.24■□□□□ 0.67
HDAC4-203ENST00000445704 LINGO4Q6UY18 593 aa19.24■□□□□ 0.67
HDAC4-203ENST00000445704 ZNF783Q6ZMS7 281 aa19.24■□□□□ 0.67
HDAC4-203ENST00000445704 Q6ZVU0 165 aa19.24■□□□□ 0.67
HDAC4-203ENST00000445704 CADM4Q8NFZ8 388 aa19.24■□□□□ 0.67
HDAC4-203ENST00000445704 FOXJ1Q92949 421 aa19.24■□□□□ 0.67
HDAC4-203ENST00000445704 C6orf106Q9H6K1 298 aaPredicted RBP19.24■□□□□ 0.67
HDAC4-203ENST00000445704 FSCN3Q9NQT6 498 aa19.24■□□□□ 0.67
HDAC4-203ENST00000445704 TMEM248Q9NWD8 314 aa19.24■□□□□ 0.67
HDAC4-203ENST00000445704 GPATCH2LQ9NWQ4 482 aa19.24■□□□□ 0.67
HDAC4-203ENST00000445704 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.24■□□□□ 0.67
HDAC4-203ENST00000445704 NUMA1Q14980 2115 aa19.24■□□□□ 0.67
HDAC4-203ENST00000445704 DCHS1Q96JQ0 3298 aa19.24■□□□□ 0.67
HDAC4-203ENST00000445704 A0A1W2PP55 124 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 METTL12A8MUP2 240 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 MEI4A8MW99 385 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 SMAD6O43541 496 aaKnown RBP19.23■□□□□ 0.67
HDAC4-203ENST00000445704 RNASEH1O60930 286 aaKnown RBP19.23■□□□□ 0.67
HDAC4-203ENST00000445704 ZMPSTE24O75844 475 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 L1CAMP32004 1257 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 HOXD12P35452 270 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 ACVRL1P37023 503 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 DPP6P42658 865 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 METAP1P53582 386 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 LIMK1P53667 647 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 SEMA3BQ13214 749 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 STPG1Q5TH74 334 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 SPECC1LQ69YQ0 1117 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 SLC23A3Q6PIS1 610 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 RGL4Q8IZJ4 473 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 AADATQ8N5Z0 425 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 TRIM11Q96F44 468 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 PEBP4Q96S96 227 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 RTKNQ9BST9 563 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 SPON2Q9BUD6 331 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 BTBD1Q9H0C5 482 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 ATP13A1Q9HD20 1204 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 FBXL12Q9NXK8 326 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 DNAI1Q9UI46 699 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 SCML1Q9UN30 329 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 ACTL7AQ9Y615 435 aa19.23■□□□□ 0.67
HDAC4-203ENST00000445704 CBX4O00257 560 aa19.22■□□□□ 0.67
HDAC4-203ENST00000445704 SEMA4FO95754 770 aa19.22■□□□□ 0.67
HDAC4-203ENST00000445704 CFIP05156 583 aa19.22■□□□□ 0.67
HDAC4-203ENST00000445704 MYBL1P10243 752 aa19.22■□□□□ 0.67
HDAC4-203ENST00000445704 SDHBP21912 280 aa19.22■□□□□ 0.67
HDAC4-203ENST00000445704 HNRNPH3P31942 346 aaKnown RBP19.22■□□□□ 0.67
HDAC4-203ENST00000445704 SLC8A1P32418 973 aa19.22■□□□□ 0.67
HDAC4-203ENST00000445704 MAPKAPK2P49137 400 aa19.22■□□□□ 0.67
HDAC4-203ENST00000445704 AIF1P55008 147 aa19.22■□□□□ 0.67
HDAC4-203ENST00000445704 ARF5P84085 180 aa19.22■□□□□ 0.67
HDAC4-203ENST00000445704 DUOXA1Q1HG43 343 aa19.22■□□□□ 0.67
HDAC4-203ENST00000445704 SYCP2LQ5T4T6 812 aa19.22■□□□□ 0.67
HDAC4-203ENST00000445704 CYP4V2Q6ZWL3 525 aaPredicted RBP19.22■□□□□ 0.67
HDAC4-203ENST00000445704 USP30Q70CQ3 517 aa19.22■□□□□ 0.67
HDAC4-203ENST00000445704 VSTM4Q8IW00 320 aa19.22■□□□□ 0.67
HDAC4-203ENST00000445704 ATP11CQ8NB49 1132 aa19.22■□□□□ 0.67
HDAC4-203ENST00000445704 FNIP1Q8TF40 1166 aa19.22■□□□□ 0.67
HDAC4-203ENST00000445704 DNASE2BQ8WZ79 361 aa19.22■□□□□ 0.67
HDAC4-203ENST00000445704 ACE2Q9BYF1 805 aaPredicted RBP19.22■□□□□ 0.67
HDAC4-203ENST00000445704 THAP2Q9H0W7 228 aa19.22■□□□□ 0.67
HDAC4-203ENST00000445704 NENFQ9UMX5 172 aa19.22■□□□□ 0.67
HDAC4-203ENST00000445704 SCINQ9Y6U3 715 aa19.22■□□□□ 0.67
HDAC4-203ENST00000445704 GON4LQ3T8J9 2241 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 CHD5Q8TDI0 1954 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 PCDH15Q96QU1 1955 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 DCDC2BA2VCK2 349 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 PLK4O00444 970 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 CDX4O14627 284 aaPredicted RBP19.21■□□□□ 0.67
HDAC4-203ENST00000445704 CREB3O43889 395 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 BNIP3LO60238 219 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 CD160O95971 181 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 IL1BP01584 269 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 EPHB2P29323 1055 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 DRD3P35462 400 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 CA9Q16790 459 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 WDR45BQ5MNZ6 344 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 DAB2IPQ5VWQ8 1189 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 C22orf39Q6P5X5 142 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 DGLUCYQ7Z3D6 616 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 VPS36Q86VN1 386 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 GANCQ8TET4 914 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 OR8D1Q8WZ84 308 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 ARHGEF2Q92974 986 aaKnown RBP19.21■□□□□ 0.67
HDAC4-203ENST00000445704 NUSAP1Q9BXS6 441 aaKnown RBP19.21■□□□□ 0.67
HDAC4-203ENST00000445704 PCED1AQ9H1Q7 454 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 NEUROG2Q9H2A3 272 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 RETREG1Q9H6L5 497 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 NOL6Q9H6R4 1146 aaKnown RBP19.21■□□□□ 0.67
HDAC4-203ENST00000445704 SGK2Q9HBY8 427 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 CAPN10Q9HC96 672 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 PCSK1NQ9UHG2 260 aa19.21■□□□□ 0.67
HDAC4-203ENST00000445704 SARDHQ9UL12 918 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms